Gene Avin_44940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44940 
SymbolmsrA 
ID7763365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4556510 
End bp4557160 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID643807345 
ProductPeptide methionine sulfoxide reductase 
Protein accessionYP_002801586 
Protein GI226946513 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTGC GCTCGCAGAT TCCCGCCCAC GAACTGGCCC TGCCCGATCC CGCCCGGGCC 
CTGCCCGGAC GCGCCGAAGC CATGCCGGTG CCGGCGGCCC ACTACGTCAA CGGCCATCCC
CTGAAACCAC CCTTCCCGGC CGGAATGCGG CAGGCGCTGT TCGGTCTCGG CTGCTTCTGG
GGCGCCGAGC GGCGCTTCTG GCAGCAGCCC GGCGTGTGGA CCACGGCGGT CGGCTATGCC
GGCGGCCTCA CGCCGAACCC GACCTACGAG GAGGTCTGCT CCGGTCTGAC CGGGCACACC
GAAGTGGTGC TGGTGGTGTT CGATCCGCAG GAAACGGATT ACCGGACGCT GCTGAAGGTC
TTCTGGGAAA TCCACGATCC GACCCAGGGC ATGCGCCAGG GCAACGACAT CGGCACCCAG
TACCGCTCGG CGATCTACTG CTTCGACGCC AGCCAGCGCG CCAGCGCCGA AGCCAGCCGG
GAACGCTTCC AGGCGGAACT GGCGAAAGCC GGCTACGGTC CGGTCACCAC GGAAATCGCC
GATGCCCCGC CCTTCTACTA TGCCGAGGAC TACCACCAGC AGTACCTGGC GAAGAACCCC
GGCGGCTACT GCGGACTGGG CGGCACCGGG GTGTGCCTGC CGCCGGCCTG A
 
Protein sequence
MVLRSQIPAH ELALPDPARA LPGRAEAMPV PAAHYVNGHP LKPPFPAGMR QALFGLGCFW 
GAERRFWQQP GVWTTAVGYA GGLTPNPTYE EVCSGLTGHT EVVLVVFDPQ ETDYRTLLKV
FWEIHDPTQG MRQGNDIGTQ YRSAIYCFDA SQRASAEASR ERFQAELAKA GYGPVTTEIA
DAPPFYYAED YHQQYLAKNP GGYCGLGGTG VCLPPA