Gene Avin_44170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44170 
Symbol 
ID7763290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4469693 
End bp4470799 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID643807272 
Producthypothetical protein 
Protein accessionYP_002801513 
Protein GI226946440 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.392978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGA AATCCGCTTC CGACCAGCAA TTCTCCAGAA ACCTGCTCGA TGTGCTGATC 
CGTGCCGGCC TGGTCGCTGT GCTGACGATC TACTGCTACC TGGTCTTCCG GCCCTTTCTC
GAGCTGATGC TCTGGTCGAT GATCCTCGCC GTCATGCTCT ATCCGCTGCA GCGCCGGCTC
GCCGCCCGCC TGGGCCACCA CGAAGGCCGG ACGGCCAGCC TCATCGTGGT GGTCGGCCTG
CTGATCCTGA TGGTGCCGAT CTACCTGCTC GGCACCTCGC TCGTCGACTC GGCGCAACAG
GTGATGGAAA CCGTCAGGAG CGGCTCCCTG CACATTCCGC CGCCGTCCGA GTCGGTGGCC
AACTGGCCGG TGATCGGCCA GCCCGTGCAC GACTTCTGGC AGCAGGCGGC TTCCGACCTG
TCCGGTTCGA TAGAGAAGTA CAGGCCTCAG CTCCGCGAGC TGCTGCTCGG CCTGCTGGGC
AAGATCGCCG GCATCGGCAC CGGCTTTCTG CTCTTCATCG CCGCCCTGAT CATCGCCGGC
ATCATCATGG CGTTCGGCGA GCTCGGCCAT CGCAGCGCCC ATCGCATCGC CGTGCGGATC
GTCGGCCCGG AACGGGGCGA GTTGCTCGTC GAGCTGTGCA CCGCCACCAT CCGCACCGTG
GCTCAGGGGG TGCTCGGCAT CGCCTTCATC CAGATGCTGC TGGTTGGGGT CGGCTTCGTG
CTTATGGGCG TCCCGGGCGC CGGCCTGCTG GCCCTGGCCG TCCTGTTGCT CGGCATCATC
CAGGTGCCGG CGACTCTGAT CACCGTGCCG GTGATCGTCT ATGTCTTCTC CAGCGAAGGC
GCCAGCCTGA CGACCATCGT GTTCGCCGTC TACAGCATCC TCGCCGGCCT GGTGGACAAC
GTGCTCAAGC CGCTGCTGCT CGGCCGCGGC GTGGACGTGC CCATGCCCGT GGTGCTGATC
GGCGCGCTCG GTGGCATGGT GGCCAGCGGC ATCCTCGGCC TGTTCATCGG CCCTATCGTC
CTGGCCGTGG GCTACCGCCT GTTCTGGCAA TGGGTGGACG ACCAGCCGGC CGGGGACGGC
AGCGGCGGGA CGGGGAGCGC CGGCTGA
 
Protein sequence
MSPKSASDQQ FSRNLLDVLI RAGLVAVLTI YCYLVFRPFL ELMLWSMILA VMLYPLQRRL 
AARLGHHEGR TASLIVVVGL LILMVPIYLL GTSLVDSAQQ VMETVRSGSL HIPPPSESVA
NWPVIGQPVH DFWQQAASDL SGSIEKYRPQ LRELLLGLLG KIAGIGTGFL LFIAALIIAG
IIMAFGELGH RSAHRIAVRI VGPERGELLV ELCTATIRTV AQGVLGIAFI QMLLVGVGFV
LMGVPGAGLL ALAVLLLGII QVPATLITVP VIVYVFSSEG ASLTTIVFAV YSILAGLVDN
VLKPLLLGRG VDVPMPVVLI GALGGMVASG ILGLFIGPIV LAVGYRLFWQ WVDDQPAGDG
SGGTGSAG