| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43780 |
|---|
| Symbol | |
|---|
| ID | 7763251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4425560 |
|---|
| End bp | 4426348 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807233 |
|---|
| Product | ABC transporter, LivG family |
|---|
| Protein accession | YP_002801474 |
|---|
| Protein GI | 226946401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.430374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCG CCGTTTCCGC CGCCGAGGCG ATCCTCGAAG TCCGCGACAT CTCCCTGTCG
TTCAAGGGCG TCAAGGCGAT CAACGCCCTG TCGTTCGAGG TGCGCCGCGG CGAGATCTGC
GCGCTGATCG GCCCCAACGG CGCCGGCAAG AGTTCGCTGC TGAACATCCT CAACGGCGTG
TACCGGCCGG ATTCCGGCGA GGTGGTCTTC GAGCGCGAGC ATTTCCGCCG TATCCACCCG
CTGGAGGCGG CGCGCCGCGG CATCGGCCGC ACCTTCCAGA ACAACGCCCT GTTCAAGAAG
ATGAGCGTGA TCGACAACCT GCTCACCGGC CTTTCGCGGC ACATGCGCAG CGGCTTCTTC
GCCCAGGCCC TCGGCCTGCC GGACGCGCGC CGCGAGGCGC GCCGGTTTCG CGAGCGGGCC
GAGGCGATCC TCGAATTTCT CGAACTGCAA CCCTGGCGCG AGGTGGCGGT GGGCAGCCTC
GCCTACGGCC TGCAGAAGCG CGTCGAACTG GGCCGCGCGC TGATCGCCGA ACCGCGCCTG
CTGCTGCTCG ACGAGCCGAT GGCCGGGATG AACGCCGAGG AGAAGCAGGA GATGAGCCGC
TTCATCGCCG ACGTCAACCG CGACCTGGGG ACCACCGTGG TGCTGATCGA GCACGACATC
AAGGTGGTCA TGGGCCTGTC CGGCCACGTG GTGGTGCTCG ACTACGGGCG CAAGGTCGGC
GACGGCACGC CGGCCGAGGT GCAGGCCAAT CCCGAGGTGA TCGCCGCTTA CCTGGGGACG
CGGCATTAG
|
|---|
| Protein sequence | MNAAVSAAEA ILEVRDISLS FKGVKAINAL SFEVRRGEIC ALIGPNGAGK SSLLNILNGV
YRPDSGEVVF EREHFRRIHP LEAARRGIGR TFQNNALFKK MSVIDNLLTG LSRHMRSGFF
AQALGLPDAR REARRFRERA EAILEFLELQ PWREVAVGSL AYGLQKRVEL GRALIAEPRL
LLLDEPMAGM NAEEKQEMSR FIADVNRDLG TTVVLIEHDI KVVMGLSGHV VVLDYGRKVG
DGTPAEVQAN PEVIAAYLGT RH
|
|---|
| |