| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43020 |
|---|
| Symbol | omlA |
|---|
| ID | 7763175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4342525 |
|---|
| End bp | 4343040 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643807157 |
|---|
| Product | outer membrane lipoprotein OmlA |
|---|
| Protein accession | YP_002801398 |
|---|
| Protein GI | 226946325 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA CCAAGCTCAT GCTGACCAGT CTACCCCTCG TGGGCCTGCT CGCGCTTGCC
GGCTGCACGA TTCCCGGGGT GTACAAAATC GACATTCAGC AGGGCAATGT CGTGACGCAG
GACATGATAG ACCAGTTGCG CCCCGGAATG ACCCGCCGGC AAGTCCGGTT TGTCATGGGA
AGCCCTCTGA TCACCGACAC CTTCCATCCG GACCGCTGGG ATTACCTGTA CAGCATAAAA
CCCGGGGGCG GCCAGCGTCT GCAGGAGCGA GTCAGTCTGG TATTCGACAC CAACGATCTA
TTGATCGGCC TGGCCGGCGA CTTCCTCCCC GGCACCACAC GCGAAGAGGA AATCATGGGC
GGCAGCGGCG GCACCGTCAT CAGGAAGGCA CCGACCGAAG AAGCCGAAGA ACCGATCAAA
CCCGGCTCCC TGCTCGAAGA GATCCAGCGC GAAGTGGACG AGGCGGAAAG CGAACCCGTA
CCGACACCGG AACCCCTGGA CCCCAGCCCG CAATAA
|
|---|
| Protein sequence | MQNTKLMLTS LPLVGLLALA GCTIPGVYKI DIQQGNVVTQ DMIDQLRPGM TRRQVRFVMG
SPLITDTFHP DRWDYLYSIK PGGGQRLQER VSLVFDTNDL LIGLAGDFLP GTTREEEIMG
GSGGTVIRKA PTEEAEEPIK PGSLLEEIQR EVDEAESEPV PTPEPLDPSP Q
|
|---|
| |