| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42790 |
|---|
| Symbol | rpsO |
|---|
| ID | 7763154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4317508 |
|---|
| End bp | 4317777 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643807134 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_002801377 |
|---|
| Protein GI | 226946304 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.441707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA CCGTTGAAGA AAAAGCCCAG ATCGTCAACG AGTACAAGCA AGCTGAAGGC
GATACCGGTT CTCCGGAAGT GCAGGTTGCC CTGCTGACCG CCAATATCAA CAAGCTGCAG
GACCACTTCA AGGCCAACGG CAAGGATCAC CACTCCCGTC GCGGTCTGAT CCGTATGGTC
AACCAGCGCC GCAAGCTGCT GGACTACCTG AAGGGTAAGG ACACCACTCG TTACAGTACC
CTGATCGGTC GTCTGGGTCT GCGTCGCTAA
|
|---|
| Protein sequence | MALTVEEKAQ IVNEYKQAEG DTGSPEVQVA LLTANINKLQ DHFKANGKDH HSRRGLIRMV
NQRRKLLDYL KGKDTTRYST LIGRLGLRR
|
|---|
| |