Gene Avin_40370 details

Gene Information

• Locus tag: Avin_40370
• Symbol: hscB
• ID: 7762923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4088980
• End bp: 4089501
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643806896
• Product: co-chaperone HscB
• Protein accession: YP_002801148
• Protein GI: 226946075
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.609538
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAATG CCAGCCATTT CGCCCTGTTC GACCTCGAGC CGGATTTTCG CCTCGATCAG 
GACCGGCTCG CGGTGCGTTA CCGCGAACTG GTGCGCCGGG TGCATCCCGA CCGTTTCGCC 
GGTGCCCCCG AACGCGAACA GCGCCTGGCG CTGGAGGAGG CCGCCCGGCT CAACGAGGCC 
TACCAGACGC TGAAAAGTCC GTCGCAGCGC GCCCGTTACC TGCTGTCCCT GCAGGGAGAA 
GAGCTGTCCC AGGAAACCAC GGTGCAGGAC CCTGCCTTCC TCATGCAGCA GATGGAGTTG 
CGTGAAGAGC TCCAGGAACT GCAGGACAGT GCCGACCTGG CCGGGGTGGC GCGCTTCAAG 
CGCCGGCTCG TGCAGGACCA GGAGCAACTG AACGAAGGTT TCGCCGCCTG CTGGGCCGAT 
CCGCGGCGGC GCGACGAGGC CGAACGCCTG GCACGGCGCA TGCAATTTCT CGACAAGCTC 
TTTGCCGAGG TCCGCCAGCT CGAAGAGCGT CTCGACGACT AA 

 

Protein sequence

MGNASHFALF DLEPDFRLDQ DRLAVRYREL VRRVHPDRFA GAPEREQRLA LEEAARLNEA 
YQTLKSPSQR ARYLLSLQGE ELSQETTVQD PAFLMQQMEL REELQELQDS ADLAGVARFK 
RRLVQDQEQL NEGFAACWAD PRRRDEAERL ARRMQFLDKL FAEVRQLEER LDD