| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38720 |
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| Symbol | truD |
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| ID | 7762761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3916494 |
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| End bp | 3917552 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643806735 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_002800987 |
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| Protein GI | 226945914 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.711816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGT CCGAACTGCT CGGTCCCAGG GCATATGGCG AAGCCTGCGG CCAGGCACTG
CTCAAGGCCT GCGCCGAGGA CTTCCAGGTC GACGAGGTGC TGGACATTCC CCTGAGTGGG
CAGGGCGAGC ATCTCTGGTT GTGGGTGGAA AAGCGCGGGC TGAATACCGA GGAGGCGGCT
CGGCGCCTGG CCCGTGCCGC CGGGATGCCG CTGAAGGCGA TCAGCTATGC CGGTCTGAAG
GATCGCCAGG CGCTGACCCG CCAGTGGTTC AGCCTGCACC TGCCGGGCAA GGCCGATCCC
GACCTCGTGG CCGCGGAGGA CGACAGCCTG CGTATCCTCG AGCGTGTCCG CCACTCGCGG
AAACTGCAAC GTGGTGCCCA CGCGGCCAAC GGTTTCAAGC TGCGGCTGAC TCGCCTCGCC
GCCGATCGTC CGGCGCTGGA TGCGCGTCTG GAGCAGCTCC GCCGCCAAGG AGTGCCCAAC
TACTTCGGCC TGCAGCGTTT CGGCCACGAC GGCGGCAATC TCGCCGAGGC CAGGGCCTTC
GCCGTGCGGC GGGAACTGCC TGCGCAACGC AACCTGCGCT CGCGTCTGCT CTCGGCAGCG
CGCAGCTATC TGTTCAACCG GGTGCTGGCC GAGCGGGTCG CGGTAGGCGA CTGGAATCGG
GCGCAGCCGG GAGACCTGCT GGCTTTCACC GACAGCCGCA GTTTCTTCCC GGCGGGCGTG
GAGGAGTGCG CCGACCCGCG CCTGGCACTG CTCGACCTGC ATCCCACCGG CCCGCTCTGG
GGCGCGGGCG GCTCCCCGGC CGGCGCGGCG ACCAAGGTGC TGGAGGATGC CGTCGGCCGG
TGCGAGGCGC CACTCGGCGA CTGGCTGGGG GAAGCGGGCA TGCTGCACGA ACGGCGCATC
CTGCGCCTCC CCATCGACCG GCTGGCGTGG CATTATCCCG CCATCGACAT CTTGCAACTG
GAATTCGTCC TGCCGGCCGG CTGCTTCGCC ACTGTCGTGG TCCGCGAGCT CGTCGATCTG
TGGCCGGCAG GCTTAATGGA CACTTCATGC GTATTCTGA
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| Protein sequence | MSESELLGPR AYGEACGQAL LKACAEDFQV DEVLDIPLSG QGEHLWLWVE KRGLNTEEAA
RRLARAAGMP LKAISYAGLK DRQALTRQWF SLHLPGKADP DLVAAEDDSL RILERVRHSR
KLQRGAHAAN GFKLRLTRLA ADRPALDARL EQLRRQGVPN YFGLQRFGHD GGNLAEARAF
AVRRELPAQR NLRSRLLSAA RSYLFNRVLA ERVAVGDWNR AQPGDLLAFT DSRSFFPAGV
EECADPRLAL LDLHPTGPLW GAGGSPAGAA TKVLEDAVGR CEAPLGDWLG EAGMLHERRI
LRLPIDRLAW HYPAIDILQL EFVLPAGCFA TVVVRELVDL WPAGLMDTSC VF
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