| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38380 |
|---|
| Symbol | |
|---|
| ID | 7762729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3881898 |
|---|
| End bp | 3883232 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643806703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002800955 |
|---|
| Protein GI | 226945882 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCG CGCGTCGGCT CCTCGCCCTG TTCGGCATCC TGTTCCTCGC CGCCCTGCCG
CTCGGCATCC ACTCTGCCCT GTACGGTAGC GAAGGGGCGT CGGACTTCGC GAGCCTCTGG
TGGGGAGCGC TGCTCGCCCT GCTGCTGCTC GCCGCGCTCG ACGCCGCCTG GCTGCACTGG
CGCCCTTCGC CACGCCTCGA ACGACGCCTG CCGGGCCATC TGCCGCAGGG GCGCTGGAGC
GAGGTACGCC TGAGCCTGGA GCACGACTAC CGGCTGGCGC TGTCCGTGGA AATCTTCGAT
CACCTGCCCG CCGGCATGGA CGGCGAGCCG CTACCACTGC GCCTGAAGCT GCGCCCCGGC
GAAGACGCCG AATGCGGCTA CCGGCTCCGC CCCCTCGAAC GCGGACATTT CCGCTTCCGG
TGGTGCGAGA TCACCCTACC CAGCCCGCTC GGCCTCTGGC AGGGACGGCG TCGCCTGGAA
CTGCCTGGCG AAACCCGCGT CTACCCGGAC TTCACCCGCC TCTACCGGGC CCGGCTGATG
GCGCTGGACA CCTGGCTCGG CCGTCTCGGC GTGCGACAAT TGCCACGTCG CGGCCTCGGC
CAGTCCTTCC ACCAGTTGCG CGAATTCCGC GACGGCGACA CCCTGCGGCA GATCGACTGG
AAGGCGACGG CGCGCAAGCA CACCCCCATC GTTCGCGAGT ACCGTGACGA GCGCGACCAG
CAGATCCTCT TCCTGCTCGA CTGCGGCCGG CACATGCGCA GCCGGGACGG CGAACTCGCC
CACTTCGACC ATGCCCTGGA TGCCTGCCTG CTGCTCGCCT ACGTGGCCTT GCGCCAGGGC
GATGCGGTGG GACTGGCGAC CCTCGCCGGC GAGCAGGAGC GCTATCTGGC CCCGGCCAAG
GGCGACGTCC AGCTGCATGC CCTGCTCAAT GCCGTCCACG ACCTGCAGCC CACCCGCCGC
CCGGCGGACT TCGCCGCCGC GGCGAACCTG CTGCTGCAGC GCCAGCGACG CCGCGCCCTG
GTGGTGATCC TCAGCAACCT GCGCGACGAG GACGACGGCG AGCTGCCGGC AGCAATCCGC
CGCCTGACCC GGCGCCATCG GGTGCTGGTC GCCAGCCTGC GCGAGGAGGT GCTCGACCGG
CTGAGCCATG CGCCGGTGGA AAGCCATGCG GACGCCCTGG CCTACTGCGG CACGATCGAT
TACCTGAACG CCCGCGACGG CCTGCACCGA CGCCTGGCGG CGGCGGGCAT CCCGTTGCTC
GACGCACGCC CCGCCGAACT GGGCCCCGAA CTGGTCGGCC GCTACCTGGC CTGGAAGCGC
GCCGGCGTGC TCTAG
|
|---|
| Protein sequence | MKPARRLLAL FGILFLAALP LGIHSALYGS EGASDFASLW WGALLALLLL AALDAAWLHW
RPSPRLERRL PGHLPQGRWS EVRLSLEHDY RLALSVEIFD HLPAGMDGEP LPLRLKLRPG
EDAECGYRLR PLERGHFRFR WCEITLPSPL GLWQGRRRLE LPGETRVYPD FTRLYRARLM
ALDTWLGRLG VRQLPRRGLG QSFHQLREFR DGDTLRQIDW KATARKHTPI VREYRDERDQ
QILFLLDCGR HMRSRDGELA HFDHALDACL LLAYVALRQG DAVGLATLAG EQERYLAPAK
GDVQLHALLN AVHDLQPTRR PADFAAAANL LLQRQRRRAL VVILSNLRDE DDGELPAAIR
RLTRRHRVLV ASLREEVLDR LSHAPVESHA DALAYCGTID YLNARDGLHR RLAAAGIPLL
DARPAELGPE LVGRYLAWKR AGVL
|
|---|
| |