Gene Avin_35890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35890 
Symbol 
ID7762483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3660127 
End bp3661056 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID643806456 
ProductRegulatory protein, LysR family 
Protein accessionYP_002800711 
Protein GI226945638 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCC TGAACGGCTT CGTGGTGTTC GTGCAGGTGG CCGAGACGCG CAGCTTCGTC 
GCCGCCGGCC GGCTGCTGGG TGTGTCCGCC TCGGCCGTCG GCAAGAGCGT GGCGCGCCTG
GAGGAGAAGC TGGGGGTGCG CCTGTTCCAC CGCAGCACGC GCAGTGTCAC GCTGACCGCT
GAGGGCACGC TGTTCCTGGA ACGCAGCCGC CGCATCCTGG CCGAGATCGA GGCGGCGGAA
CTGGAGTTGT CGCAAGCCAC CGCAGCGCCG CGCGGGCGCC TGCGGGTGAG CCTGCCGCTG
GTCAGCTCGC TGGTGCTGCC GGTCCTCGGC GAGTTCATGC GCGAATACCC CGAGATCGAG
TTGGACCTGG ACTTCACCGA CCGGATGGTC GATGTGATCG AGGAAGGTTT CGACGCGGTG
GTACGCACGG GCGAGCCGAC CGACTCTCGC CTCACGGCGC GCAGGTTGGG CACCTTCCGC
TCGGTGCTGG TCGCTTCGCC TGGCTACCTG GATTTGCGGG GGACACCCCA AGTACCTGCC
GATCTTCTGT TGCACACCTG CCTGCACTAC CGCTTCCCCA ACAGCGGCAA ACTGGAAACC
TGGGCGCTGC GACAGGAACC TGGCGCACCC GAACTGCAAT TGCCCACCTC GATGATCTGC
AACAACATCG AGACGCGCGT GTGCTTTGCG CTGCAAGGAC TGGGGATCGC CTATTTGCCG
GACTTCGCCA TCCGCGAGCC GTTGGCCGAC GGCCGGCTTC AACCCATCCT CGCTGACCAT
GTGGAGCGCG CCGGCGTCTT CCACGTGCTT TGGCCGGCGA GCAAGCACCC CTCGCCGAAG
GTGCGGGCGC TGGTGGACTT CCTGAGCGCG AGGGTGTTTC CGGCCACCAA GAGCAAGACC
ACGAGCCCCA GAGGTCAGCG CAGTCGATAA
 
Protein sequence
MDSLNGFVVF VQVAETRSFV AAGRLLGVSA SAVGKSVARL EEKLGVRLFH RSTRSVTLTA 
EGTLFLERSR RILAEIEAAE LELSQATAAP RGRLRVSLPL VSSLVLPVLG EFMREYPEIE
LDLDFTDRMV DVIEEGFDAV VRTGEPTDSR LTARRLGTFR SVLVASPGYL DLRGTPQVPA
DLLLHTCLHY RFPNSGKLET WALRQEPGAP ELQLPTSMIC NNIETRVCFA LQGLGIAYLP
DFAIREPLAD GRLQPILADH VERAGVFHVL WPASKHPSPK VRALVDFLSA RVFPATKSKT
TSPRGQRSR