Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_35480 |
Symbol | |
ID | 7762443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3621365 |
End bp | 3621991 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643806417 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002800672 |
Protein GI | 226945599 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATCA CCTATGACTT CAAGGGACAG GTGGCACTGG TCACCGGCGC CGCCTCGGGC ATGGGACTGG CCACGACCCG CGCCTTTGCC GCCGCCGGGG CCTCTGTCGT GCTGTCGGAT GTGAACGAGG CAGCCCTGCA GCACGCGACG GAATCCCTCG AGGACGCTGG TGGCGACGTT ATCGGCGTGG CCTGCGACGT TTCCGACGAG GCACAGGTAG AGGCGCTGGT CGGACAGGCC GTTTCGACCT TCGGCCGACT GGACACCGCT CTCAACAATG CGGGCATACA GGTTCCCGCC AGCGAGATCG CCGATCAGCC GCTGGCGGAT TTCGACCGTG TCACCGCCGT CAACCTGCGC GGCGTCCGGG CCTGCATGAA ACACGAACTG GTGCAGACGC GGCATCAGGG CAGCGGTGCG ATCGTCAACT GTTCGTCGAT TGGCGGACTG GTCGGCCGCG GACTGCTTGC CGCCTACCAT GGCTCCAAGC ACGGCGTGGT CCCTGACCCG CAGCGCCGCC CCCGAATATG CCGCGCGCGG CATCCGCGTG AACGCCGTAT GTCCCGGTAC GATCGACACG CCCATGGTGT CGAACATGCT GGACAGAGGC ATGCTGGTCA TGGATGA
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Protein sequence | MGITYDFKGQ VALVTGAASG MGLATTRAFA AAGASVVLSD VNEAALQHAT ESLEDAGGDV IGVACDVSDE AQVEALVGQA VSTFGRLDTA LNNAGIQVPA SEIADQPLAD FDRVTAVNLR GVRACMKHEL VQTRHQGSGA IVNCSSIGGL VGRGLLAAYH GSKHGVVPDP QRRPRICRAR HPRERRMSRY DRHAHGVEHA GQRHAGHG
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