| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_31000 |
|---|
| Symbol | |
|---|
| ID | 7762000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3205419 |
|---|
| End bp | 3206186 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643805975 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002800239 |
|---|
| Protein GI | 226945166 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC AAGCCAACAG CACCTCCCTT CCCCTGACCG GCAAGGTCGC GCTGGTCACC
GGCGGCTCGC GCTCCATCGG CGCTGCAGTT GCCAAGCGCC TGGCCGCCGA TGGCGCCAAG
GTCGCCTTCA CCTACTTCGG CTCGCAACAG CTGGCCGAAG AGACGGCCAG CGCCATCGAG
GCCGCTGGCG GTACCGCGCA GCCGATCCTG GCTGACTCCG GCAATCCGGA GGCCGTGCGC
GCCGCCATCG CCCAGGTCGT CGAGACCTAT GGTGGCCTCG ATATCCTGGT CAACAACGCC
GGCATCGCCG TCGGTGGTGG TCCGATCGAG CAGATCAGCT TCGACGATTA TCAGCGCATG
ATTGCAGTCA ACGTCACCGG CGTGTTCGTC GCCACCCAGG AAGCCGTACG CCACATGCGC
GAAGGCGGCC GCATCGTCCA CATCGGCAGT TCGATGACGC GCTACGCGTC CTTCCCGGGC
GCGTCGCTGT ACACGCTCAC CAAGGGTGCG GTGACCGGCT TCAACCGCAG TCTGGCGCGC
GACCTGGGCC CGCGCGGCAT CACGGTGAAC ACCGTGCATC CCGGACCGAC CGACACCGAC
ATGAATCCCG CCGATGGCGA AGTGGCCAAG CTGGTGGGGC CTGGCATGGC CGTCGGCCGT
TACGGCCAGC CGGCGGAGAT CGCCAGCGTG GTCGCCTTCC TTGCAAGCCC GGGTGCCTCG
TTCGTGACCG GCGCCGACGT GGTGGCCGAT GGCGGCTTCA CCTCCTGA
|
|---|
| Protein sequence | MNTQANSTSL PLTGKVALVT GGSRSIGAAV AKRLAADGAK VAFTYFGSQQ LAEETASAIE
AAGGTAQPIL ADSGNPEAVR AAIAQVVETY GGLDILVNNA GIAVGGGPIE QISFDDYQRM
IAVNVTGVFV ATQEAVRHMR EGGRIVHIGS SMTRYASFPG ASLYTLTKGA VTGFNRSLAR
DLGPRGITVN TVHPGPTDTD MNPADGEVAK LVGPGMAVGR YGQPAEIASV VAFLASPGAS
FVTGADVVAD GGFTS
|
|---|
| |