| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_30900 |
|---|
| Symbol | |
|---|
| ID | 7761990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3196135 |
|---|
| End bp | 3197001 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643805965 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_002800229 |
|---|
| Protein GI | 226945156 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CCCCGCCGCT GCGACCGGAA TACGAAATCG CCCTGCAACC TTTGACCGAT
CTGCCGCTCG AGCGCGAGCT GTCGCTGGCG CAGCGCCTGT GGCAGCAGGC CTGGCTGCGC
AAGTCGCTGA TCCTCATGAC GCTGGCGCTG CTCTGGGAAG TGGCTGCCCG CCTGCAGGGC
AACGACCTGC TGTTGCCGAG CTTCCTGCAG GTCGCCCGCG CCCTGGTCGA GGACCTGGCC
AGCGGCGAGT TGCTGGAGAA GGTGGCGATC TCCCTGTCGG TGCTGGTCAA GGGCTATCTG
ATCGGCATCC TGCTGGCCTT CGTCCTGACC AGCCTGGCGG TTTCCAGTCA GCTCGGCCGC
GACCTGCTGT CGACCCTGAC GGCGATGTTC AACCCGCTGC CGGCCATCGC CCTGCTGCCG
GTGGCGCTGC TCTGGTTCGG CCTGGGCGAG GGCAGCCTGA TCTTCGTGCT GGTGCATTCG
GTGCTCTGGT CGCTGGCGCT GAACACCTAC GCCGGCTTTC TCGGCGTCCC GGAAACCCAG
CGCATGGTCG GGCGCAACTA CGGCCTGCGC GGGCTGCGCT TCGTCGCCCT GATCCTGGTG
CCCGCCGCGC TGCCGTCGAT TCTCTCCGGC CTGAAGATCG GCTGGGCCTT CGCCTGGCGC
ACCCTGGTCG CCGCCGAATT GGTGTTCGGC GCCTCGTCCG GGCAGGGCGG GCTCGGCTGG
TACATCTTCC AGAACCGCAA CGAGCTGTAC ACCGACAAGG TGTTCGCCGG GCTCGCGGTG
GTGATCCTCA TCGGCCTGCT GGTGGAAAGC CTGGTCTTCG CCCTGCTGGA ACGCTACACC
GTCAGGCGCT GGGGCATGCA GCGCTGA
|
|---|
| Protein sequence | MSQTPPLRPE YEIALQPLTD LPLERELSLA QRLWQQAWLR KSLILMTLAL LWEVAARLQG
NDLLLPSFLQ VARALVEDLA SGELLEKVAI SLSVLVKGYL IGILLAFVLT SLAVSSQLGR
DLLSTLTAMF NPLPAIALLP VALLWFGLGE GSLIFVLVHS VLWSLALNTY AGFLGVPETQ
RMVGRNYGLR GLRFVALILV PAALPSILSG LKIGWAFAWR TLVAAELVFG ASSGQGGLGW
YIFQNRNELY TDKVFAGLAV VILIGLLVES LVFALLERYT VRRWGMQR
|
|---|
| |