Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_29920 |
Symbol | wbpP |
ID | 7761893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3095970 |
End bp | 3097073 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805865 |
Product | NAD-dependent epimerase protein |
Protein accession | YP_002800133 |
Protein GI | 226945060 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0374178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCT ACCAACGCCT GCTCCACGAC CTGCCGCAAA CGCCCGCCAC CTGGCTGATC ACCGGGGTGG CCGGGTTCAT CGGCTCAAAC CTGCTGGAAA CCCTGCTCGG ACTCGACCAG TGGGTGGTGG GCCTGGACAA CTTCTCCACT GGCCACCCGC ACAATCTGGA AGAGGTCCGC CAAAGGACTT CCGCGCCGCG CTGGGCCAGG TTCCAGCTCA TCCGCGGCGA TATCCGCGAG TTGCACGACT GCCGCCAGGC GATGACCTTC GCGGCGGTCG TGCCGGGCTG CCGGCCCCGG CCGGTCGAGC ACGTCCTCCA CCAGGCGGCC CTCGGCTCGG TGCCGCGCTC GCTGGAAGAC CCCATCGCCA CCAACGCCAG CAATGTCGAC GGCTTCCTCA ACATCCTGGT GGCCGCCCGC GATGCCGGGG TCAAGAGCTT CACCTACGCC GCCAGCAGCG CCGCCTACGG CGACCACCCC GGTCTGCCGA AGATCGAGGA CATCGTCGGT CGGCCGCTCT CCCCCTATGC GGTGAGCAAG TACGTCAACG AACTGTACGC CGACGCTTTC GCCCGCAACT ACGGGCTGCA CAGCATCGGT CTGCGTTACT TCAACGTCTT CGGCAAGCAC CAGGACCCGG AGGGCGCCTA TGCCGCGGTG ATCCCGAAAT GGATCGCGGC AATGCTGCGC GACGAGGAGG TGTTCATCGA CGGCGATGGC AGCACCAGCC GCGACTTCTG CCACGTCGAC AACGCCGTGC AGGCCAACCT GCTCGCCGCC TGCGCCGAAG CCCGCGCGCG CAATCAGGTC TACAACATCG CCGTCGGCGA ACGCAGCACG CTCCAGCAGT TGTTCCAGGC GTTGCGCCAG AGCCTGGCGA AAAACGGCGT GCGCTACGGC CGGGCGCCGC TCCATCGAGA TTTCCGTCCG GGAGACGTAC GCCATTCCCT GGCGGACATC GGCAAGGCGC GGCGCCTGCT GGGCTACCTC CCGCAATACG ACCTGCGGAC CGGCATCGCC CAGGCGATGC CCTGGTACAT CGCCCGGAAC CCGACGTCGG TGTCTTCGTC GTCCGCGCCG GCGCAATTCG CTGCGCAACG GTGA
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Protein sequence | MTRYQRLLHD LPQTPATWLI TGVAGFIGSN LLETLLGLDQ WVVGLDNFST GHPHNLEEVR QRTSAPRWAR FQLIRGDIRE LHDCRQAMTF AAVVPGCRPR PVEHVLHQAA LGSVPRSLED PIATNASNVD GFLNILVAAR DAGVKSFTYA ASSAAYGDHP GLPKIEDIVG RPLSPYAVSK YVNELYADAF ARNYGLHSIG LRYFNVFGKH QDPEGAYAAV IPKWIAAMLR DEEVFIDGDG STSRDFCHVD NAVQANLLAA CAEARARNQV YNIAVGERST LQQLFQALRQ SLAKNGVRYG RAPLHRDFRP GDVRHSLADI GKARRLLGYL PQYDLRTGIA QAMPWYIARN PTSVSSSSAP AQFAAQR
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