| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28710 |
|---|
| Symbol | |
|---|
| ID | 7761776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2957620 |
|---|
| End bp | 2959185 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643805750 |
|---|
| Product | ABC transporter, ATP binding component |
|---|
| Protein accession | YP_002800018 |
|---|
| Protein GI | 226944945 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCG GCGCCAAGCC GCTGTTCGAG AACGTCTCCG TCAAGTTCAA CAACGGTAAC
CGCTACGGTC TGATCGGCGC CAACGGCTGC GGAAAGTCCA CTTTCATGAA AATCCTCGGC
GGCGATCTGG AGCCCTCCGC CGGCCAGGTG ATGCTTGAGC CCAACGTGCG CCTCGGCAAG
CTGCGCCAGG ATCAGTTCGC CTACGAGGAT TTTTCCGTGA TCGATACCGT GATCATGGGC
CACGAGGAAC TGTGGAACGT GAAGGCCGAA CGCGACCGTA TCTACGCGCT GCCGGAGATG
AGCGAAGAGG ACGGCATGAA GGTCGCCGAT CTCGAGGTGC AGTTCGCCGA GCTGGACGGC
TATACCGCCG AATCCCGCGC CGGCGAGCTG CTGCTCGGGG TGGGCATTCC GCTGGACCAG
CACTTCGGCT CGATGAGCGC CGTGGCGCCC GGCTGGAAAC TGCGCGTGCT GCTGGCCCAG
GCGCTGTTCT CCGACCCGGA CGTGCTGCTG CTCGACGAGC CGACCAACCA CCTGGACATC
AACACCATCC GCTGGCTGGA AAGCGTGCTC ACCGCGCGCA ACTCCACCAT GATCATCATC
TCCCACGACC GTCACTTCCT GAACAGCGTC TGCACCCACA TGGCCGACCT GGACTACGGC
GAGTTGCGCC TGTTTCCCGG CAACTACGAC GAGTACATGA CCGTGGCGAC CCAGGCCCGC
GAGCGCCTGC TCGCCGACAA CGCCAAGAAG AAGGCGCAGA TCGCCGAGCT GCAGACCTTC
GTCAGCCGCT TCTCGGCCAA CGCCTCCAAG GCCAAGCAAG CCACCAGCCG CGCCCGGCAG
ATCGACAAGA TCCAGTTGGA AGAGGTCAAG CCGTCGAGCC GGGTCAGCCC CTTCATCCGC
TTCGAACAGA ACAAGAAGCT GCACCGCCAG GCGCTGACCC TGGAGAAGGT CGGCCAGGGC
TTCGACGGCA TGACGCTGTT CAAAGACCTG TCGCTGCAGG TCGAAGCCGG CGAGCGGGTC
GCCATCATCG GCCCCAACGG TATCGGCAAG ACCACCCTGC TGCGCACGAT GGTCGGCGAG
ATGCCGCCGC AGTCCGGCGA GGTGAAGTGG GCCGAGAGCG CCGAAATCGG CTACTTCGCC
CAGGACCACG CCGACGACTT CGAGCAGGAT CTGACCCTGT TCGACTGGAT GGCCCAGTGG
ACCCAGGGCG GCGAGCAGCT GGTGCGCGGT ACCCTCGGGC GCATGCTGTT CTCCAACGAC
GAGATCAAGA AGTCGGTGAA AGTGATTTCC GGCGGCGAAC AGGGGCGCAT GCTGTTCGGC
AAGCTGATCC TCGCCAAACC CAACGTGCTG GTGATGGACG AGCCGACCAA CCACCTCGAC
ATGGAGTCCA TCGAAGCGCT CAACCTGGCC TTGGAGAACT ACCCCGGCAC GCTGATCTTC
GTCAGCCACG ACCGCGAGTT CGTCAGCTCG CTGGCCACCC GCATCATCGA ACTCTCCGCC
AGCGGCGTGA CCGACTTCAG CGGCAGCTAC GACGACTACC TGCGCAGCCA GGGCGTGGCG
ATCTGA
|
|---|
| Protein sequence | MQFGAKPLFE NVSVKFNNGN RYGLIGANGC GKSTFMKILG GDLEPSAGQV MLEPNVRLGK
LRQDQFAYED FSVIDTVIMG HEELWNVKAE RDRIYALPEM SEEDGMKVAD LEVQFAELDG
YTAESRAGEL LLGVGIPLDQ HFGSMSAVAP GWKLRVLLAQ ALFSDPDVLL LDEPTNHLDI
NTIRWLESVL TARNSTMIII SHDRHFLNSV CTHMADLDYG ELRLFPGNYD EYMTVATQAR
ERLLADNAKK KAQIAELQTF VSRFSANASK AKQATSRARQ IDKIQLEEVK PSSRVSPFIR
FEQNKKLHRQ ALTLEKVGQG FDGMTLFKDL SLQVEAGERV AIIGPNGIGK TTLLRTMVGE
MPPQSGEVKW AESAEIGYFA QDHADDFEQD LTLFDWMAQW TQGGEQLVRG TLGRMLFSND
EIKKSVKVIS GGEQGRMLFG KLILAKPNVL VMDEPTNHLD MESIEALNLA LENYPGTLIF
VSHDREFVSS LATRIIELSA SGVTDFSGSY DDYLRSQGVA I
|
|---|
| |