| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28630 |
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| Symbol | gspF |
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| ID | 7761768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2949996 |
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| End bp | 2951186 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643805742 |
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| Product | Type II secretion system protein F |
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| Protein accession | YP_002800010 |
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| Protein GI | 226944937 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTC AGATCAAAGG CATGCGCAAC GCCGCGGAAG TGGTATCGCT GGTCCTCGAG
GCAGCGGGCC CGGACGACGC CCGGCGCCTC GCCGAACACC AGGGCCTGAA GGTGCTCAGC
CTGCGCGCCG AAAGGCGTTG GTCGCCGCTC CGCTGGCGGC GCCGCGAGGC CTTCCCGCTG
GTGTTGTTCA GCCAGGAACT GACCACCCTG CTGAACGCCG GCCTGGCGCT GATCGACGCC
CTCGAAAGCC TTGCCGAGAA GGAGTCCGAC GCCCAGGCGC GCAAGATCCT CGCCGATCTG
GTGCGCCTGC TCTACGAGGG CAAGTCCCTC TCTCAGGCGC TGGGCGAATT CCCCGCGGTC
TTTCCGCCCC TCTACGTGGC GCTGGTGCAG TCCAGCGAGA AGACCGGCGC GGTCGGCGAT
GCCCTGGGCC GCTATGTCGC CTACCGCACG CGCATGGACG AAGTGCGCCA GAAGATCGTC
AGCGCCTCGG TCTATCCGCT CCTGCTGCTG GTGGTCGGCA ACGGGGTACT GCTGTTTCTG
ATCGGCTACG TGGTGCCGCG CTTCAGTCTG GTCTTCGAGG GGCTGGGCTC CAACCTGCCA
TGGCTGTCCC GGGTGCTGCT GAGCGTCGGG CAGTTCATCC ATACCCATCA GGAGGCGCTG
CTCGGCAGCC TGCTGCCGAG CCTGGTCCTC CTTGCCCTCC TGCTGCGCCA GGAGCGGGTT
CGCAGGGCCC TCGGCCGGCA GGTAGAGAAG GTTCCGACCA TCCGCGAGCG CCTGTTCATC
TACGAGATGG CGCGCTTCTA CCGCTCCCTG GGCATCCTGC TGCAGGGCGG TATCCCCATC
CTCACCGCCC TGGGCATGGT CCGCGGCCTG CTCGGCCCGG GCTCGCGCAC CCGCCTGGAC
CGGGCCGCCG AACTCATCCG CGAGGGCCAC GCCCTGTCCC GCTCGCTGGA AGAGAACCGC
CTGGCGACAC CAGTTTCCCT GCGCATGCTG CGTGCCGGCG AGCAGGCCGG CAATCTCGGC
GTCATGATGG AACGCACCGC GGACTTCTAC GACGAGGAGA CCGGACGCTG GATCGACTGG
TTCGTGCGGC TGTTCGAGCC GCTGCTGATG ACCTTCATCG GCCTGATCAT CGGGGTGATC
GTGGTCCTGA TGTACATGCC GATCTTCGAA CTGGCATCGA GCATCCAGTA G
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| Protein sequence | MRFQIKGMRN AAEVVSLVLE AAGPDDARRL AEHQGLKVLS LRAERRWSPL RWRRREAFPL
VLFSQELTTL LNAGLALIDA LESLAEKESD AQARKILADL VRLLYEGKSL SQALGEFPAV
FPPLYVALVQ SSEKTGAVGD ALGRYVAYRT RMDEVRQKIV SASVYPLLLL VVGNGVLLFL
IGYVVPRFSL VFEGLGSNLP WLSRVLLSVG QFIHTHQEAL LGSLLPSLVL LALLLRQERV
RRALGRQVEK VPTIRERLFI YEMARFYRSL GILLQGGIPI LTALGMVRGL LGPGSRTRLD
RAAELIREGH ALSRSLEENR LATPVSLRML RAGEQAGNLG VMMERTADFY DEETGRWIDW
FVRLFEPLLM TFIGLIIGVI VVLMYMPIFE LASSIQ
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