| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28580 |
|---|
| Symbol | |
|---|
| ID | 7761763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2946966 |
|---|
| End bp | 2947631 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643805737 |
|---|
| Product | Response regulator |
|---|
| Protein accession | YP_002800005 |
|---|
| Protein GI | 226944932 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC TGTTGGTGGA AGACTCGGTC AGCCTGGCCG ATGAGCTGGT GGCCAGCCTG
CAGCGCCAGG GCTATGCCGT CGATTGGTTG GCCGATGGGC GCGATGCCGC CCGCCAGGGG
GCCTGCGAGC CTTACGATCT GATGATTCTC GATCTGGGAC TGCCCGGTAA GCCGGGGCTG
GAGGTGTTGC GCGAGTGGCG CGCCCAGGGA CTGGCCACAC CGGTACTGGT GCTCACCGCC
CGCGCTTCCT GGGCGGAACG CATCGAGGGG CTGAAGGCGG GGGCCGACGA CTATCTGTGC
AAGCCCTTCC ATCCCGAGGA ACTGCAACTG CGCATCCAGG CGCTGCTGCG CCGGGCCCAC
GGGCTGGCCA ATCAGCCTCA GTTGGAAGCG GGGGGACTGC AGCTCGATGA AGCCCGTCAG
GTGGTTCGCT GCGGTACGGA GGATATCGAG CTCACCGCCG CCGAGTTCCG CCTGCTGCGC
TACCTGATGC TGCACCCGGG CCAGTTGCTC TCCAAGGGGC AACTCGCCGA GCATCTCTAC
GACGGCGAAA CCGAGCGCGA CTCCAACGTC ATCGAGGTGC ACATCAACCG CCTGCGCGGC
AAGCTCGGCC GGACAGTGAT CGAAACCCGC CGAGGCCAGG GCTACCGCTT CGCCGGTGTG
CATTGA
|
|---|
| Protein sequence | MRLLLVEDSV SLADELVASL QRQGYAVDWL ADGRDAARQG ACEPYDLMIL DLGLPGKPGL
EVLREWRAQG LATPVLVLTA RASWAERIEG LKAGADDYLC KPFHPEELQL RIQALLRRAH
GLANQPQLEA GGLQLDEARQ VVRCGTEDIE LTAAEFRLLR YLMLHPGQLL SKGQLAEHLY
DGETERDSNV IEVHINRLRG KLGRTVIETR RGQGYRFAGV H
|
|---|
| |