| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28270 |
|---|
| Symbol | clpA |
|---|
| ID | 7761732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2912696 |
|---|
| End bp | 2914966 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643805706 |
|---|
| Product | ATP-dependent clp protease, ATP-binding subunit, ClipA |
|---|
| Protein accession | YP_002799974 |
|---|
| Protein GI | 226944901 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACC GTGAGCTCGA AGTCACTCTC AATCTTGCCT TCAAGGAGGC TCGTGCAAAA
CGTCATGAGT TCATGACGGT GGAGCACCTC CTGCTGGCGC TTCTGGACAA CGAAGCCGCG
GCTGCCGTAC TGCGGGCCTG CGGTGCGAAT ATCGACAAGC TCCGGCATGA CTTGCAGGAG
TTCATCGACT CCACGACTCC TCTGATTCCA CAGCACGATG AAGAGCGTGA GACCCAGCCT
ACCCTCGGCT TCCAGAGGGT GCTGCAGCGC GCGGTCTTTC ATGTGCAGAG TTCTGGTAAG
CGGGAAGTGA CCGGAGCCAA CGTGCTCGTG GCCATCTTCA GCGAACAGGA AAGCCAGGCC
GTCTTTCTGC TCAAGCAGCA GAGTGTGGCT CGTATAGACG TGGTGAACTA CATTGCTCAT
GGCATTTCCA AAGTGCCGGG TCATGGCGAT CATCCTGATG GCGAGCATGA GATGCAGGAC
GAAGAGGGTG GAGACGCTTC GGCTTCCGGT CATCCCCTGG AGGCCTATGC GAGCAATCTG
AACGAACTGG CTCGTCAGGG GCGGATCGAT CCGCTGGTCG GGCGTGAGTT CGAGGTCGAG
CGGGTCGCGC AGATCCTGGC CCGGCGGCGC AAGAACAATC CTCTGCTGGT GGGCGAGGCC
GGGGTCGGCA AAACGGCCAT CGCCGAAGGA TTGGCGAAAC GCATCGTCGA CAATCAGGTT
CCGGATCTTC TGACGCACAG CGTCGTGTAC TCCCTCGACC TCGGGGCATT GCTCGCCGGT
ACCAAATATC GCGGTGACTT CGAGAAGCGC TTCAAGGCAT TGCTCAATGA GTTGCGCAAG
AAGCCGCATG CCATCCTGTT CATCGACGAG ATCCACACCA TCATAGGCGC CGGTGCCGCC
TCCGGCGGTG TGATGGATGC CTCGAACCTG CTCAAGCCGC TTCTCTCGTC CGGAGAGATC
CGCTGCATCG GTTCGACCAC CTTCCAGGAG TTCCGCGGCA TCTTCGAGAA GGATCGGGCC
TTGGCGCGTC GTTTCCAGAA GGTCGATGTG ATCGAGCCTT CGGTCGAGGA TACCGTGGGT
ATCCTTCGCG GGCTCAAGCC GCGTTTCGAG CAGCACCATG GCATCGAGTA CAGCGATGAG
GCGCTGCGGG CCGCAGCGGA GCTGTCCTTT CGCTATATCA ACGATCGCCA CATGCCTGAC
AAAGCCATCG ATGTTATCGA CGAGGCAGGT GCCTTCCAGC GTCTCCAGCC GGAGGACCGG
CGTGCCAAGC TTATCGATGT GGCTCAGGTC GAGGATATCG TTGCCAAGAT CGCTCGTATT
CCGCCCAAAC ATGTTTCCAC TTCCGACAAG GAACTGCTGC GTAATCTCGA GCGCGATCTC
AAGTTGACCG TATTCGGTCA GGATGCCGCT ATCGATTCGC TCGCCACGGC AATCAAGTTG
TCGCGGGCTG GCTTGAAGTC ACCGGACAAG CCGGTCGGTT CCTTCCTCTT CGCCGGTCCC
ACCGGGGTGG GCAAGACCGA GGCGGCCCGG CAGTTGGCCA AGGCGCTGGG TGTGGAGCTG
GTGCGTTTCG ACATGTCCGA GTACATGGAG CGGCACACGG TTTCGCGGCT GATCGGCGCG
CCTCCGGGAT ACGTCGGGTT CGATCAGGGG GGGCTGCTGA CCGAGGCGAT TACCAAGCAG
CCGCATTGCG TGCTGTTGCT GGATGAAATC GAGAAGGCGC ACCCCGAGGT GTTCAATCTG
CTATTGCAGG TCATGGACCA TGGCACGCTG ACCGACAACA ACGGGCGCAA GGCTGATTTC
CGCAGTGTCA TCATCATCAT GACCACCAAT GCCGGGGCGG AAACCGCGGC CCGTGCCTCG
ATCGGCTTTA CTCTGCAGGA TCATTCTTCC GATGCTATGG AGGTGATCAA GAAGAGCTTC
ACTCCCGAGT TCCGCAACCG TTTGGATACC ATTATCCAGT TCGGTCGCCT GAGTCACGAG
GTGATCAAGA ATATCGTCGA CAAGTTCCTT ACCGAACTTC AGGCGCAACT GGAAGACAAG
CACGTACAGC TGGATGTTTC CGAGCGGGCT CGTGGTTGGC TCGCCGAGCA TGGATATGAT
GCTCAGATGG GCGCGCGGCC GATGGCTCGC CTGATTCAGG ACAGGATCAA GCGTCCCCTG
GCCGAGGAAA TTCTCTTCGG TGAGTTGGCC GAGCATGGGG GAGTGGTGCA TATCGATCTG
GAGGGTGAGG AGCTTTCCTT CGACTTCGAG ACGGCAGCCG AAGTGGCTTG A
|
|---|
| Protein sequence | MLNRELEVTL NLAFKEARAK RHEFMTVEHL LLALLDNEAA AAVLRACGAN IDKLRHDLQE
FIDSTTPLIP QHDEERETQP TLGFQRVLQR AVFHVQSSGK REVTGANVLV AIFSEQESQA
VFLLKQQSVA RIDVVNYIAH GISKVPGHGD HPDGEHEMQD EEGGDASASG HPLEAYASNL
NELARQGRID PLVGREFEVE RVAQILARRR KNNPLLVGEA GVGKTAIAEG LAKRIVDNQV
PDLLTHSVVY SLDLGALLAG TKYRGDFEKR FKALLNELRK KPHAILFIDE IHTIIGAGAA
SGGVMDASNL LKPLLSSGEI RCIGSTTFQE FRGIFEKDRA LARRFQKVDV IEPSVEDTVG
ILRGLKPRFE QHHGIEYSDE ALRAAAELSF RYINDRHMPD KAIDVIDEAG AFQRLQPEDR
RAKLIDVAQV EDIVAKIARI PPKHVSTSDK ELLRNLERDL KLTVFGQDAA IDSLATAIKL
SRAGLKSPDK PVGSFLFAGP TGVGKTEAAR QLAKALGVEL VRFDMSEYME RHTVSRLIGA
PPGYVGFDQG GLLTEAITKQ PHCVLLLDEI EKAHPEVFNL LLQVMDHGTL TDNNGRKADF
RSVIIIMTTN AGAETAARAS IGFTLQDHSS DAMEVIKKSF TPEFRNRLDT IIQFGRLSHE
VIKNIVDKFL TELQAQLEDK HVQLDVSERA RGWLAEHGYD AQMGARPMAR LIQDRIKRPL
AEEILFGELA EHGGVVHIDL EGEELSFDFE TAAEVA
|
|---|
| |