Gene Avin_27300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27300 
Symbol 
ID7761637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2803311 
End bp2804342 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID643805606 
ProductTranscriptional regulator, LacI family 
Protein accessionYP_002799879 
Protein GI226944806 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CCAAGAACGA TAAGAACCCC CGTACCACCG GACGTCCGAC ACTCAACGAA 
GTGGCGCGCC GCGCCGGCGT CAGTCCGATC ACCGCCTCGC GGGCCCTGCG CGGTATTCCC
AGCGTCGCCG AGGAGTTGGC GCAGCGGGTC CGCGAGGCGG CCAGCGAACT GGGCTACGTG
GCCAATCCGG CGGCGCGGGC CCTGGCTTCC GCGCGCAGCC AGACCGTGGC GGTGGTGGTG
CCCTCGCTGG GCAACCAGTT GTTCGTCGAA ACCCTCGAGG CCATCCACGC GGTGATGCGG
CCGAGAGGGC TGGAGGTGCT GATCGGCAAC TCCCACTACT CGCGCGACGA GGAAGAGGAC
CTGATCCGCA ACTACCTCGC CTACCAGCCG CGCGGCCTGC TGCTCACCGG CTTCGAGCGG
ACCGAGAGCG CGCGGCGCAT GCTTGAGTCC AGCGGGATTC CCTGCGTCTA CATGATGGAT
CTGGATTCCG GCGCCGGTCT GCACTGCGTC GGCTTCTCGC AGATACGCGC TGGCGCGGCG
GCGGCCGAAC ACCTGATCTC CCGCGGCCGG CGGCGGATGG CCTTCGTCGG CGCCCAGCTC
GACCAGCGCA CCCTGCTGCG CGGCGAAGGC TTCCGCCGGG CCCTGCAACA GGCCGGACTC
TACGATCCCG CCCTGGAACT GCTGACCCCG CGGCCATCCT CCGTCGGTCT CGGCTGCGAA
CTCTTCGCCC AGCTCATGGC CAGTCATCCG CAGATCGACG CCATTTTCTT CGGCAACGAC
GACCTGGCCC ACGGTGCCCT GCTGGAGGCC ATGCGCCGTG GCGTGAAGAT TCCCGAGCAG
GTGGCGGTGA TCGGTTTCAA CGACCTGCCG GCCTCGTCCT TCACCGTGCC GCGGCTGAGC
AGCATCCGTA CGCCGCGCGA GGCCATCGGG CGCCGTGCCG CCGAGTTGCT GCTCGCGTTG
ATGGCCGGCC AGCCGATCGC CGAACCGGTG CAGGACATCG GCTTCGAACT GATGGCGCGC
GAAAGCACCT GA
 
Protein sequence
MTTPKNDKNP RTTGRPTLNE VARRAGVSPI TASRALRGIP SVAEELAQRV REAASELGYV 
ANPAARALAS ARSQTVAVVV PSLGNQLFVE TLEAIHAVMR PRGLEVLIGN SHYSRDEEED
LIRNYLAYQP RGLLLTGFER TESARRMLES SGIPCVYMMD LDSGAGLHCV GFSQIRAGAA
AAEHLISRGR RRMAFVGAQL DQRTLLRGEG FRRALQQAGL YDPALELLTP RPSSVGLGCE
LFAQLMASHP QIDAIFFGND DLAHGALLEA MRRGVKIPEQ VAVIGFNDLP ASSFTVPRLS
SIRTPREAIG RRAAELLLAL MAGQPIAEPV QDIGFELMAR EST