| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_26210 |
|---|
| Symbol | phyH |
|---|
| ID | 7761529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2677358 |
|---|
| End bp | 2678554 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643805499 |
|---|
| Product | Phytanoyl-CoA dioxygenase protein |
|---|
| Protein accession | YP_002799772 |
|---|
| Protein GI | 226944699 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA TCCGTCCGTC CGACCGGCTG TTCGTCGGCC CCGAGGCCGC CGACATCGAA
GAATTCGCCG CGCTGTGCGC CAGGGAAACG GACCCGGCCC TCTATCCGCA CAGTTCGGCG
GTGCAGAAGA ACGTGGTCAT CTACGACGGC CAGGCGCTGC TCGCCGACCT GCAGCGGGAC
AAGCCGGCCG TGCAGAAGGA AATGCACGAT CTGCTGCGCA ACGGACCCGG CGTGCTGGTC
GTCAGCGGCG CCTATGCCGA CCTGGCCGTC GTCGACCGCC ACACCGAGGT GTTCGAGCGG
ATTTTCGAAG CCGAGGCCAG GCAGGGCATC GCCTCCGACC ACTTCGCCAA GGCCGGCGCC
AACGGTCGGA TCTGGAACTC GTTGCAGAAA TCCGCCGAGC TTTCGCCGGA ATCCTTCATC
GAATACTACG CCAACCCGCT CATCGGCCTG GTGGCCGAAG CCTGGCTCGG CCCCCACTAT
CAACTGACGA CCCAGGTGAA CGTCGTCCGT CCCGGCGGAC AGGCGCAGCA GGCGCACTGC
GATTACCACC TGGGCTTCCA GAGCGTCGAG GAAGTGGCCC GTTATCCCGT TCCGCTGCAC
ACCTTGTCGA AATCCCTGAC CCTGCAATGC GCCGTCGCCC ACTCCGACAT GCCGGTGGAG
ACGGGGCCGA CCTTGCTGCT GCCTTTCTCC CAGCAGTACG AACTGGGCTA TCTCGCCTGG
CGGCGCGCCG ACTTCATCGA TCACTTCCAG CGCCATGCCG TGCAACTGCC GCTGAGCAAG
GGCGACATAG TGTTCTTCAA TCCGGGGCTC TTCCACGCCG CCGGTACCAA CCGGACGACG
GACCGGCAGA GGATCGCGAA TCTGCTGCAG ATTTCGGTGG CCTTCGGCAA GCCTATGGAA
AGCGTCGACC GGGATGCCAT GTCGCTGGCG CTGTATCCGG CGCTGTCCAG AATCGTGGCG
CAGAAGAAGC TGGATGAGGT GAATCTGCGC GCGGTCGTCG CCGCCGTGGC GGATGGCTAT
TCCTTCCCGA CCAACCTGGA TACCGATCCG CCCTTGCAAG ACCTGGCCCC GCAGACCGCC
CAGCAATTCA TCTGGCAGGC CCTGCAGGAA GGCTATTCCT TCGAGCGCTT CAGCGAGGGG
GTCCGGGACA TGCAGCGCAG GCGCCAGGCG AAGTCCTTCG ACAAGCTGTC GCACTGA
|
|---|
| Protein sequence | MSEIRPSDRL FVGPEAADIE EFAALCARET DPALYPHSSA VQKNVVIYDG QALLADLQRD
KPAVQKEMHD LLRNGPGVLV VSGAYADLAV VDRHTEVFER IFEAEARQGI ASDHFAKAGA
NGRIWNSLQK SAELSPESFI EYYANPLIGL VAEAWLGPHY QLTTQVNVVR PGGQAQQAHC
DYHLGFQSVE EVARYPVPLH TLSKSLTLQC AVAHSDMPVE TGPTLLLPFS QQYELGYLAW
RRADFIDHFQ RHAVQLPLSK GDIVFFNPGL FHAAGTNRTT DRQRIANLLQ ISVAFGKPME
SVDRDAMSLA LYPALSRIVA QKKLDEVNLR AVVAAVADGY SFPTNLDTDP PLQDLAPQTA
QQFIWQALQE GYSFERFSEG VRDMQRRRQA KSFDKLSH
|
|---|
| |