Gene Avin_25090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25090 
Symbol 
ID7761423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2510364 
End bp2511599 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content67% 
IMG OID643805393 
ProductMajor facilitator superfamily transporter 
Protein accessionYP_002799668 
Protein GI226944595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTG AGAACGCGGA GCACGCACCT TGGCGACTGC GTTTCTGGTC GATCTTCACC 
GGACAAGCAC TCTCGCTTGT CGGTTCGGCC CTGACCCAGT TCGTCCTGCT GTGGTGGATC
ACCGACACGA CAGGAAGCGT CGCCGCGCTG GGCATCGCCG GCGTGGTGGC CCTGCTGCCG
CAAGCACTGC TGGGGCCGCT GGGCGGCACG CTGGCCGATC GCTACAGCCG TCGCCGGTTG
ATGGTGGTCG CCGATCTCAT CAGCGCGGCC TGCATGGTCG TGCTGATCGT CCTGTTCCTC
ACCAGTCGCG TTGCGCTCTG GCACCTCTAC GTGATGATGG CCGTTCGCAG TGCCATGCAG
GCCTTCCAGC AACCGGCCGC GGCCGCCAGC ACGGCCATGC TGGTGCCAGG CCGTTTCCTG
TCGCGTGCCG CGGGACTCAA CCAAACGCTG TACGGCATCA TGACCGTGGG CGCGGCACCC
TTGGGTGCAC TGGCCATCAG CGCGATGCCG GTGGGATGGG CGCTCGGCAT CGACGTGGTG
ACCGCCGTGC TGGGGGTCGT ACCGCTGCTG ATATACGCCA TCCCACAACC GCGGGCCGCT
GCCCAAGAGC GTACCAGCCC GTGGCAAGAG TTCCGGGAAG GGGTCGATAC GGTCTGGAGC
GATGCGGCCC TGCGCCAGCT CTACGGCCTG ATCACGGCCG CCGTACTGGT CATCATGCCG
TCGTTCACGC TGGTTCCGTT GCTGGTGAAG GCGCATTTCG GCGGCGGGCC GACGCAGGTG
GCGCTGATCG AAAGCCTGGG CGGCATCGGC ATGGTCGCCG GCGGCATCCT CGTCGCGGCG
GTAGCGCCGC GGCGACGTAT CCCCTGGGTG CTGTGGGGGT TCGCGCTGTC TTGCTTCGCG
CTGGCGCTTA CCGCACTGCC TTCGGGCGGG ATGTTCTGGC TGGCGGTCCT GTTCTGGGTC
GTCAGCTCGA TCACCTACGC CCTGGGCAAC GCGCCGTTCA CGGCGATTCT GCAAACCCGT
GTGCCCAACC ACCTGCAAGG GCGAGTGCTC TCCCTGCTGA CGACGCTGAT GGGCTTGGCA
GCGCCCGTGG GGCTGGCGAT CGCAACGCCG CTGGGCGAAG CCATCGGAAC TCGCTGGCTG
TTCGTCCTGC TCGGCACAGT AGGCGGGCTG GTGATGCTGC TGGGGTTCCT GTCCCCGGCG
ATTCGGCGCG TCGATGACCA GACCGTGCTG CGGTGA
 
Protein sequence
MTIENAEHAP WRLRFWSIFT GQALSLVGSA LTQFVLLWWI TDTTGSVAAL GIAGVVALLP 
QALLGPLGGT LADRYSRRRL MVVADLISAA CMVVLIVLFL TSRVALWHLY VMMAVRSAMQ
AFQQPAAAAS TAMLVPGRFL SRAAGLNQTL YGIMTVGAAP LGALAISAMP VGWALGIDVV
TAVLGVVPLL IYAIPQPRAA AQERTSPWQE FREGVDTVWS DAALRQLYGL ITAAVLVIMP
SFTLVPLLVK AHFGGGPTQV ALIESLGGIG MVAGGILVAA VAPRRRIPWV LWGFALSCFA
LALTALPSGG MFWLAVLFWV VSSITYALGN APFTAILQTR VPNHLQGRVL SLLTTLMGLA
APVGLAIATP LGEAIGTRWL FVLLGTVGGL VMLLGFLSPA IRRVDDQTVL R