Gene Avin_21980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21980 
Symbol 
ID7761116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2196621 
End bp2197436 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID643805083 
ProductABC transporter, ATP binding component 
Protein accessionYP_002799364 
Protein GI226944291 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGCA TAGAGTTTCG CAACGTGTCG GTGCGCTATC CCGCCGCGCC CAACGACGGC 
TGGGTGGTGA AGAACCTGTC CCTGAGCCTG GCCAAGGGCG AGTTCGTCTC GCTGATCGGC
CCTTCCGGCT GCGGCAAATC CACCCTGCTC AAGCTCGCCG CGGGAATGCA GGCGCCGACG
CTCGGCAGCC TGAGCATCGA CGGCCGGCCG ATCACGGGGC CGGGCCCGGA ACGCGGCGTG
GTGTTCCAGG AGTACGGCGT GTTCCCCTGG CTCAGCGTGC GGCAGAACAT CGAGTTCGGC
CTGACCCTGC GCGCCAACCG CCGCGCCCCG GCCGAACGCG CCGCCATCGT CGACAAGTAC
CTGGAGCTGA TGGGCCTGGC CGACTTTCGC GACGCGCTGC CGGGCACGCT GTCCGGCGGC
ATGCGCCAGC GGGTGGCGCT GGCCCGCGCC TATGCGGTGG CCCCGGACTA TCTGCTGATG
GACGAACCCT TCGCCGCGCT GGACGCGCAG ACGCGCCTGG TGATGCACGA CCTGCTGCTG
GAACTGCAGG GCCGCGAGCG CAAGGGCGTG CTGCTGATCA CCCATTCGGT GGACGAAGCC
CTCTACCTCT CCTCGAAGAT CGTGCTGATC AGCGCCCGTC CCGCGCGCCT GCTGGAGGTG
GTCGAGGTTC CCTTCGCCCA TCCCCGCGAC GAGACGCTGC GCGCCGATCC CCGTTTCGCC
CGGCTGCACG CCCACCTGCG CCAGCGGGTG ATGCAGGCCT ACGCCGAACA GCAACACCAG
GACAACCCCC ATGCCTTGCC CCCGGAGAAT CCCTGA
 
Protein sequence
MGGIEFRNVS VRYPAAPNDG WVVKNLSLSL AKGEFVSLIG PSGCGKSTLL KLAAGMQAPT 
LGSLSIDGRP ITGPGPERGV VFQEYGVFPW LSVRQNIEFG LTLRANRRAP AERAAIVDKY
LELMGLADFR DALPGTLSGG MRQRVALARA YAVAPDYLLM DEPFAALDAQ TRLVMHDLLL
ELQGRERKGV LLITHSVDEA LYLSSKIVLI SARPARLLEV VEVPFAHPRD ETLRADPRFA
RLHAHLRQRV MQAYAEQQHQ DNPHALPPEN P