| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_21570 |
|---|
| Symbol | |
|---|
| ID | 7761078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2157041 |
|---|
| End bp | 2158243 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643805046 |
|---|
| Product | Acyl-CoA dehydrogenase family protein |
|---|
| Protein accession | YP_002799327 |
|---|
| Protein GI | 226944254 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTT CAGTGCAGCA GCCCGCCATT TCCCCGGCGG CGGGCGATCG AGGTCCGGCG
GGGGGCGGGA GCCCGGAAGG GTTCCTGGCC GAGCTTACCC GGTTCCTGGC CGCGACCGCC
GCGGAATACG ACCGTTCCGG AAACTTTCCC TGGGCGAATT TCCAGTACCT GCATGAGCGC
GGCTTGCTGG CCTTCACCGT GCCGCGCGAG CAGGGCGGCG GCGGCGCCGG CCTGGGCGAG
GCCCGGCAGG TCGTCTCGGC AGTCGCCAGG GGCGAGCCTT CGACCGCGCT CATCCTGGTC
ATGCAGTACC TGCATCAGCG TACCCTGCAG CACAGCGCCT CCTGGCCCGA ACACCTGCGC
CGGCGGGTGG TGCAAGAGGC GGTGCGCGAC GGCGCGCTGA TCAACTCGTT CCGCGTCGAG
CCGGAACTGG GCACGCCGGC CCGCGGCGGA CTGCCCGCCA CCCTGGCGCG GCGCACCCCC
GACGGCTGGA TCATCGACGG CAGCAAGATC TATTCGACCG GCAGCGTCGG CATCACCTGG
TATCTGGTCT GGGCGCGCAG CGACGACCCG GAGCCGCTGG TCGGCGCATG GCTGGTCCGC
AAGGACAGCC CCGGCATCCG CATCGTCGAG GACTGGGATC ACCTGGGAAT GCGTGCCACC
TGCAGCCATC GGGTCGATTT CACCGATGTC CGGGTGCCGC TCGACCATGC GGTGAACGTC
AGCCCCTGGC TGGCGCCCGT CGCGGAGCTG AATGCCGACG GCGCCCTGTG GATGGCCGTA
CTGCTGTCTT CGCTCTACGA CGGCGTGGCC CAGGCCGCCA GGGACTGGCT GGTCGCCTGG
CTGCAGACGC GCAGGCCATC GAACCTCGGC GCCACGCTGG CGAGCCTGCC GCGTTTCCAG
GAACTGGTCG GGCGCATCGA CACCCTGTTG TTCGCCAACC GCAACCTGCT CGATTCGGCC
GCCGCCGGGC AGGTTCCGCC CGGACATGCC GGGCAGATCA AGCAACTGGT GACCGGCAAC
GCCATACGCG CCGTCGAGCT GGCCGTCGAG GCGGCGGGCA ATCCGGGGCT TTCCCGCCGC
TATCCGCTGG AGCGGCATTA CCGGGACGTA CTCTGCGCCA GGGTGCACAC CCCGCAGGAC
GACGTGGTCT TCGGCGGGAT CGGCAAGGCG GCGCTGCACA CAACCGAAGG AGCGAAAGCA
TGA
|
|---|
| Protein sequence | MSLSVQQPAI SPAAGDRGPA GGGSPEGFLA ELTRFLAATA AEYDRSGNFP WANFQYLHER
GLLAFTVPRE QGGGGAGLGE ARQVVSAVAR GEPSTALILV MQYLHQRTLQ HSASWPEHLR
RRVVQEAVRD GALINSFRVE PELGTPARGG LPATLARRTP DGWIIDGSKI YSTGSVGITW
YLVWARSDDP EPLVGAWLVR KDSPGIRIVE DWDHLGMRAT CSHRVDFTDV RVPLDHAVNV
SPWLAPVAEL NADGALWMAV LLSSLYDGVA QAARDWLVAW LQTRRPSNLG ATLASLPRFQ
ELVGRIDTLL FANRNLLDSA AAGQVPPGHA GQIKQLVTGN AIRAVELAVE AAGNPGLSRR
YPLERHYRDV LCARVHTPQD DVVFGGIGKA ALHTTEGAKA
|
|---|
| |