Gene Avin_21110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21110 
Symbolalc 
ID7761036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2105827 
End bp2106828 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID643805006 
Productallantoicase 
Protein accessionYP_002799287 
Protein GI226944214 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.871688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATGA AAAAGTACAG CGTTCCGTTC GAGCAATACC TGAATCTCGC CGACGCCCGC 
CTCGGCACCC GCGCCCTCTA CGTCACCGAC GACTGGTTCG CGCCGGTCGA GCGGATGCTC
CAGCCTACCG AGCCCGAGTG GAAGGAAGGC GTCTACGACG ACAACGGCAA GTGGATGGAC
GGCTGGGAGT CGCGGCGCAA GCGCTTCGAG GGCTACGACC ATGCGCTGCT GCGCCTCGGC
GTGCCCGGCG CGATCAAGGG CGTGGACATC GATACCCGCC ATTTCACCGG CAACTACCCG
CCGTCCGCCT CGCTGGAAGC CTGCTTCCTC GCCGAAGGCG ATCCCGACGA ACGCACCGAA
TGGGTCGAGG TGCTGCCGGC GGTCGAACTC AAGGGCAACA GCCACCACTA CCACAGTGTC
ACCGACCCGC GCCCCTGGAG CCACCTGCGC TTCAACATCT ACCCGGACGG CGGCGTGGCG
CGCCTGCGCG TCTATGGCAT CCCGTACCGC GACTGGAGCG CGGTCGGCGC CGACGAGACG
CTCGACCTGG CCGCCGCGCT CAATGGCGGG CGCGCCCTGG CCTGTTCCGA CGAGCACTTC
GGGCGCATGG GCAACCTGCT CAACCCGGGA CGCGGAGCGA ACATGGGCGA CGGCTGGGAA
ACCGCGCGCC GCCGCACGCC GGGCAACGAC TGGGTGATCG TCGCCCTGGG CCATCCCGGC
GAGATCGAGC GGATCGTCGT CGACACCCTG CATTTCAAGG GCAACTACCC GGACAGTTGC
TCGATCCAGG CGGCCTGGGT GAAGGGCGGC ACCGACAGCC AGATCGAGAC CCAGAGCCTG
TTCTGGCGCG AGCTCTTGCC CAGCCAGAAG CTCTCGATGC ACCGGGAACA CGAGTTCGTC
GAAGAGATCC GCCCGCTCGG GCCGATCAGC CACGTGCGCC TGAACGTCTT CCCCGACGGC
GGCGTCAGCC GGCTGCGATT GTTCGGAAAG GTGGCGAAGT GA
 
Protein sequence
MPMKKYSVPF EQYLNLADAR LGTRALYVTD DWFAPVERML QPTEPEWKEG VYDDNGKWMD 
GWESRRKRFE GYDHALLRLG VPGAIKGVDI DTRHFTGNYP PSASLEACFL AEGDPDERTE
WVEVLPAVEL KGNSHHYHSV TDPRPWSHLR FNIYPDGGVA RLRVYGIPYR DWSAVGADET
LDLAAALNGG RALACSDEHF GRMGNLLNPG RGANMGDGWE TARRRTPGND WVIVALGHPG
EIERIVVDTL HFKGNYPDSC SIQAAWVKGG TDSQIETQSL FWRELLPSQK LSMHREHEFV
EEIRPLGPIS HVRLNVFPDG GVSRLRLFGK VAK