Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_20840 |
Symbol | |
ID | 7761009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2077223 |
End bp | 2078434 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643804979 |
Product | multidrug/chloramphenicol efflux transporter, major facilitator superfamily MFS_1 |
Protein accession | YP_002799260 |
Protein GI | 226944187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.290056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCAGC GCAACGTTGT CCATCGCGGT GTCTGGGCGC TGGCGGTCAC GGCGTTCGCC ATCGGCGTGG CCGAGTTCAT CGTGGTCGGC GTGCTGCCGG CCATCGCCGA GGACCTCGGC GTACCGCTGG CACGCGCCGG CGGACTGGTG GGGTTGTACG CGCTGGCATT GGCCATCGGT ACGCCGCTGG TGGTACTGGG ATTGGCCCGG CTGCCGCGCA AGCCTGTGCT GCTGACCTTG GTGGCTGTGT TTCTCGCCGG CAACCTGCTG TCGGCGCTCT CGACCAGCTA TGCGGTGCTG CTGGCCGGGC GCATCTTGAC GGCGGTGGCT CACGGCAGCT TCTTCGCCAT CGGCGCGACA CTGGCAGCCC GGCTGGCCCC CGAGGGGCAG GCCAGCCGGG CGATCGCATT GATGTTCGCG GGCCTCACGC TGGCGATGGT GATCGGCGTG CCGCTGGGTA GCCTGATCGG CAACGGCCTG GGCTGGCGGC TGCCATTCTT CGCCGTCGTG CTGCTGGCCG CGCTGGGCTG GCTGGCGACC GCACTGTGGG TGCCGGCCCT GCCGGCGCAG GCGGCGGGGC GCGCCGGTAG CCAACTGGCG GCGCTGGCGC GACCCGAGAT CCTGACGATG ATGAGCATCA CCATCCTCGG CTTCGGTGCC AGCTTCGCGG CCTTCACTTT CATCACGCCG ATCCTGACCG CCATCACCGG CTTCTCGGCC CGGATCTCCA GCCTGCTGCT GGTGGTGTTC GGCGCGGCGA CGCTGGTGGG CAATCTCATG GGCGGGCGCT GGGCCGCCAG CCTGGGCTGG CCGGTAGCGC TGCGGCGCAT GCTGGTGGGC CTGCTGGTCG TACTCGTGGC GATCGCATTG CTGATGCCCT ACCGGACACC GATGGTGGCG CTGCTGTTCG TCTGGGGCCT GCTGGCCTTC GGTATGTCGC CGGGCTTTCA GGCCGGCATG CTGGCTACCG CCGAACGCTG GACGCCGCGT GCGGTGGACT TCGCTTCGGC GTTGAACATC TCGGCATTCA ACCTGGGTAT CACGCTGGGG GAGACGTTGG GTAGCGTACT GGTGGTGCGA GACGACATGG CGCTGACGCC TTGGGCGGGT GTCGGGCTGG CGTTGATCGC GCAGTTGCCG CTGGCGTGGC TGGCACAGCG GTCGTCCGGC GCCGGAACGG TACCGGCCGC TGGTGGATGG GAGGGGCGAT GA
|
Protein sequence | MSQRNVVHRG VWALAVTAFA IGVAEFIVVG VLPAIAEDLG VPLARAGGLV GLYALALAIG TPLVVLGLAR LPRKPVLLTL VAVFLAGNLL SALSTSYAVL LAGRILTAVA HGSFFAIGAT LAARLAPEGQ ASRAIALMFA GLTLAMVIGV PLGSLIGNGL GWRLPFFAVV LLAALGWLAT ALWVPALPAQ AAGRAGSQLA ALARPEILTM MSITILGFGA SFAAFTFITP ILTAITGFSA RISSLLLVVF GAATLVGNLM GGRWAASLGW PVALRRMLVG LLVVLVAIAL LMPYRTPMVA LLFVWGLLAF GMSPGFQAGM LATAERWTPR AVDFASALNI SAFNLGITLG ETLGSVLVVR DDMALTPWAG VGLALIAQLP LAWLAQRSSG AGTVPAAGGW EGR
|
| |