Gene Avin_20100 details

Gene Information

• Locus tag: Avin_20100
• Symbol: uvrB
• ID: 7760939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1997646
• End bp: 1999655
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643804908
• Product: excinuclease ABC subunit B
• Protein accession: YP_002799191
• Protein GI: 226944118
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAAT TTCAGCTGGT GACCCGTTTC CAGCCCGCCG GCGACCAGCC CGATGCCATC 
CGCCAGATGG TCGAGGGGCT GGAGGCCGGC CTGTCGCACC AGACCCTGCT CGGGGTGACC 
GGCTCCGGCA AGACCTTCAG CATCGCCAAC GTGATCGCCA GGGTACAGCG TCCGACCCTG 
GTGCTGGCGC CCAACAAGAC CCTGGCGGCG CAGCTCTACG GCGAGTTCAA GAGCTTCTTT 
CCGCACAACG CGGTGGAGTA CTTCGTTTCC TACTACGACT ACTACCAGCC GGAAGCCTAT 
GTGCCGTCCT CCGACACCTA CATCGAGAAG GACGCCTCGA TCAACGACCA CATCGAGCAG 
ATGCGCCTGT CGGCGACCAA GGCGCTGATG GAGCGGCCGG ACGCGATCAT CGTCGCCACC 
GTCTCGTCGA TCTACGGCCT GGGCGATCCG GCCAGCTACC TGAAGATGGT GCTGCACATC 
GACCGCGGCG ACCGACTCGA CCAGCGCGCC CTGCTGCGCC GCCTGGCCGA CCTGCAGTAC 
ACCCGCAACG ACCTGGACTT CGCCCGCGCC ACCTTCCGCG TGCGTGGCGA CGTGATCGAC 
GTCTTCCCCG CCGAATCCGA GCTGGAGGCG ATCCGCATCG AGCTGTTCGA CGACGAGGTG 
GAGAGTCTGG CCGCCTTCGA TCCCTTGACC GGCGAGGTGA TCCGCAAGCT GCCGCGCTTC 
ACCTTCTACC CCAAGAGCCA CTACGTCACC CCGCGCGAGA CGCTGCTGGA AGCGGTGGAG 
CAGATCAAGG CCGAACTCAA GGAGCGCCTG GAGCACCTGC GCGAGCGCGG CAAGCTGGTG 
GAGGCGCAGC GCCTGGAACA GCGCACCCGC TTCGACCTGG AGATGATCCT CGAACTGGGC 
TACTGCAACG GCATCGAGAA CTACTCCCGC TACCTCTCCG GCCGTGCGCC GGGGCTGCCG 
CCGCCGACCC TCTACGACTA CCTGCCGGAC AACGCGCTGA TGGTGATCGA CGAATCCCAC 
GTCACCGTCC CGCAGGTCGG CGCCATGTAC AAGGGCGACC GTTCGCGCAA GGAGACCCTG 
GTGGAATACG GCTTCCGCCT GCCGTCGGCG CTGGACAACC GGCCGATGCG CTTCGACGAA 
TGGGAGCGCA TCGCCCCGCA GACCATCTTC GTCTCGGCGA CCCCCGGCCC CTACGAAGCC 
GAGCACGCCG GACGGGTGAT CGAACAGGTG GTGCGCCCCA CCGGGCTGGT CGACCCCGAG 
CTGGAGGTGC GCCCGGCGCT GACCCAGGTG GACGACCTGC TGTCGGAGAT CCGCAAGCGC 
GTCGCCGTCG AGGAGCGCGT GCTGGTCACC ACCCTGACCA AGCGCATGGC CGAGGACCTC 
ACCGATTACC TCGGCGACCA CGACGTGCGG GTGCGCTACC TGCACTCGGA CATCGACACC 
GTGGAGCGCG TGGAGATCAT CCGCGACCTG CGCAGCGGCG CCTTCGACGT GCTGGTGGGC 
ATCAATCTGC TGCGCGAGGG GCTGGATATG CCCGAAGTAT CGCTGGTGAC GATTCTCGAC 
GCGGACAAGG AAGGTTTCCT GCGCAGCGAA CGCTCGCTGA TCCAGACCAT CGGCCGCGCC 
GCGCGCAACC TCAACGGCAA GGCGATTCTC TACGCCGACA GCATCACCGG TTCGATGCGG 
CGCGCCATCG ACGAGACCGA GCGGCGCCGG GCCAAGCAGA TCGCCTTCAA CGAAACCCAC 
GGCATCGTGC CCAGGGGCGT CAAGAAGGAC ATCCAGGACA TCCTCGAAGG CGCCGTGGTG 
CCCGGTGCGC GCGGTCGCAA GCGGGTGGCC AGGGCGGCGG AGGAGAGCGG CCAGTACGCC 
GCCGAGCTGC GCTCGCCGAG CGAGATCGAC AAGCGCATCC GTCAGCTCGA GGAGAAGATG 
TACGCCTTGG CCCGCGATCT GGAGTTCGAG GCCGCGGCGC GGCTGCGCGA CGAGATCCAG 
GCGCTGCGCG AGCGGCGGCT GCAGGTCTGA 

 

Protein sequence

MSEFQLVTRF QPAGDQPDAI RQMVEGLEAG LSHQTLLGVT GSGKTFSIAN VIARVQRPTL 
VLAPNKTLAA QLYGEFKSFF PHNAVEYFVS YYDYYQPEAY VPSSDTYIEK DASINDHIEQ 
MRLSATKALM ERPDAIIVAT VSSIYGLGDP ASYLKMVLHI DRGDRLDQRA LLRRLADLQY 
TRNDLDFARA TFRVRGDVID VFPAESELEA IRIELFDDEV ESLAAFDPLT GEVIRKLPRF 
TFYPKSHYVT PRETLLEAVE QIKAELKERL EHLRERGKLV EAQRLEQRTR FDLEMILELG 
YCNGIENYSR YLSGRAPGLP PPTLYDYLPD NALMVIDESH VTVPQVGAMY KGDRSRKETL 
VEYGFRLPSA LDNRPMRFDE WERIAPQTIF VSATPGPYEA EHAGRVIEQV VRPTGLVDPE 
LEVRPALTQV DDLLSEIRKR VAVEERVLVT TLTKRMAEDL TDYLGDHDVR VRYLHSDIDT 
VERVEIIRDL RSGAFDVLVG INLLREGLDM PEVSLVTILD ADKEGFLRSE RSLIQTIGRA 
ARNLNGKAIL YADSITGSMR RAIDETERRR AKQIAFNETH GIVPRGVKKD IQDILEGAVV 
PGARGRKRVA RAAEESGQYA AELRSPSEID KRIRQLEEKM YALARDLEFE AAARLRDEIQ 
ALRERRLQV