Gene Avin_19560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19560 
Symbol 
ID7760888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1950145 
End bp1950648 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID643804856 
Productsodium hydrogen antiporter subunitE, ShaE 
Protein accessionYP_002799140 
Protein GI226944067 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0245623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGT TCCGTTGGCT GGCGCATCCG ACCCTGACCC TGCTGCTGAC CGTCATCTGG 
CTGATGCTGG CGAATACCTT CGGCTTCGGC CATCTTCTGC TCGGGCTGTT GCTCGGCTGG
GCGATCCCGC TGCTTTGCCG CGACTTCCTG ATCGCGATGC CACGGGTGCG CCGGCCGTTC
CGGCTGGGCC TGTTCGTGCT CCAGGTGTTC GCCGACATCC TCGTCGCCAA CCTGCATGTG
GCGAGGCTGG TACTGGGGCC CGAGGCACGC CTGAACCCGG CCTTCGTCGA GGTGCCGATG
GCCATCGAGG ACGAGTTCGT CCTGGCGCTG CTGACCAACA TCATCTCCCT GACGCCGGGC
ACGGTATCCG CCGATCTCGA CGTCGAACGC CGGACCCTGC TGCTGCATGC CCTGGATGCG
CCGGACCCCG CGCGACTGGT CGCCGAGGTG AAACGCCGCT ACGAGACGCC CCTGCTGGAG
ATCTTCCAAT GCTCGCCCAC GTGA
 
Protein sequence
MSGFRWLAHP TLTLLLTVIW LMLANTFGFG HLLLGLLLGW AIPLLCRDFL IAMPRVRRPF 
RLGLFVLQVF ADILVANLHV ARLVLGPEAR LNPAFVEVPM AIEDEFVLAL LTNIISLTPG
TVSADLDVER RTLLLHALDA PDPARLVAEV KRRYETPLLE IFQCSPT