| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_19550 |
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| Symbol | shaD |
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| ID | 7760887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1948649 |
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| End bp | 1950148 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643804855 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_002799139 |
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| Protein GI | 226944066 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0216033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCACG CTCCCATCCT GCCGATCCTC CTGCCGCTGT TCGCCGGCAG TCTGCTGCTG
CTCGGCCATC GCCTGGGCCA TGGCATCCAG CGCCGTCTGT CCCTGGCCGC CACCTGGGCG
CTGTTGCCGC TCGCCGTCTG GGCGCTGCTC CTGGCCTCGG ATGGCCGGTT GCGCATCTAT
GCGCTGGGCG ACTGGCCGGC GCCGTTCGGC ATCGTCCTGC TGCTCGACCG GCTCAGCGCG
CTGATGCTGC TGGTCACCGC GCTGCTGGCC GGTTTCGCGC TGCTCTATGC GGTGCGCGGC
GACGACCTGC GGGGGCCGAA TTTCCACGCC CTGTTCCAGT TCCAACTGGT CGGCATCAAC
GGCGCCTTCC TGACCGCGGA TCTGTTCAAC CTGTTCGTGT TCTTCGAGAT CCTGCTGATC
GCCTCCTATG CGCTGCTGCT GCACGGCAAC GGTGCCGCCC GGGTGCGCGC CGGTCTGCAT
TACGTACTGC CCAACCTGCT CGGCTCGGCG TTCTTCCTGA TCGGCATCGG CATCCTCTAC
GGTCTGACCG GGACCCTGAA CATGGCCGAC CTGGCCCGCC GGGTGGCTGG CGCCGATGCG
GGCCAGGCGC CGCTGCTGGC CACCGCCGGC TACCTGCTGC TGGTGGTGTT CGGCCTCAAG
GGGGCGATAC TACCGCTGCA TTTCTGGTTG CCGCGCGCCT ATGCCGCGGC AACGGCGCCG
GTGGCGGCGC TCTTCGCGAT CATGACCAAG GTCGGCCTGT ACGCCATCCT GCGGGTCTTC
GGGTTGATCT TCGGCGCCCA GGCCGGACCG CTCGCCGGCC TGGCGCAGCC CTGGCTCTGG
ACGCTGGCCG TCGCGACCCT GGCCGCCGGG GTGTTCGGTG TCCTGGCGGC GCGCGACCTG
CAGGTGCAAC TGGCCTACCT GGTGATCGTC TCGGTCGGCA CCCTGCTGCT CGGCCTCGCC
CCGGGTAGCC TGGAAGGCTA TGCCGCGGCG CTCTACTACT TGCTGCACAG CACCCTGGTC
GCCGGCGGCC TGTTCCTGCT CGCCGACCTG GTGGCTCGCC AGCGCGGCGA ACTGGGCGGC
GCCCTGCAGC GCGGACCGAA CCTGCACCAG CCGGGCCTGC TGGGCGGGCT GTTCTTCTTC
GGAGCCATCT CGGTGGCCGG CCTGCCGCCG CTTTCCGGTT TCCTCGGCAA GCTGATGCTG
TTGCGCGCGG TACCGGTCGG AATCGCGGCC CTGGCGATCT GGACTGTGGT GCTGTGCGGC
GGGCTGGGCC TGCTGATCGC CCTCGGCCGT TCCGGCAGCA CCCTGTTCTG GCGCGGTTCC
GGCGCTCCGT CAGGCGAGCC GGCCGACGGT GTGAGGCTGC TGGCCTGTGC CGGCCTGCTA
TCGGGCAGCC TGCTACTGAC GATGGCGGCA GCGCCGGTGC AGGCCTATGT GCGGGAAACC
GCCCGACAAT TGCTGGACCC GGCCGCCTAT CTGCGGATCG GCGCGGGAGG CGGCGCATGA
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| Protein sequence | MMHAPILPIL LPLFAGSLLL LGHRLGHGIQ RRLSLAATWA LLPLAVWALL LASDGRLRIY
ALGDWPAPFG IVLLLDRLSA LMLLVTALLA GFALLYAVRG DDLRGPNFHA LFQFQLVGIN
GAFLTADLFN LFVFFEILLI ASYALLLHGN GAARVRAGLH YVLPNLLGSA FFLIGIGILY
GLTGTLNMAD LARRVAGADA GQAPLLATAG YLLLVVFGLK GAILPLHFWL PRAYAAATAP
VAALFAIMTK VGLYAILRVF GLIFGAQAGP LAGLAQPWLW TLAVATLAAG VFGVLAARDL
QVQLAYLVIV SVGTLLLGLA PGSLEGYAAA LYYLLHSTLV AGGLFLLADL VARQRGELGG
ALQRGPNLHQ PGLLGGLFFF GAISVAGLPP LSGFLGKLML LRAVPVGIAA LAIWTVVLCG
GLGLLIALGR SGSTLFWRGS GAPSGEPADG VRLLACAGLL SGSLLLTMAA APVQAYVRET
ARQLLDPAAY LRIGAGGGA
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