| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17880 |
|---|
| Symbol | |
|---|
| ID | 7760723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1776857 |
|---|
| End bp | 1778725 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643804687 |
|---|
| Product | NADH-ubiquinone oxidoreductase, chain 5 |
|---|
| Protein accession | YP_002798976 |
|---|
| Protein GI | 226943903 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCG CACTGCAGAT CTTCATCTTT CTACCGCTGA TCGGCTTCCT GATCAGCCTG
ATCCACCCGG AACGGGACGA GAAACGGATC TCGCGCACCG CGCTGGTCAC GGTCGGCGTC
AACCTCGCCG GCTTCGTCCT GTTCCTGGCG TACTGGGCGC TGCGCGGCTT TCCCACCCTG
GAGTTGAAGG ATTTCGTGCT GTTCCACACG GACAGCTACG AGTTCTACAT CGACTTCCTG
TTCGACCGGA TCACTGCGAC CTATGTGCTG GTCGGTACCT TCCTGACCTT CATGGTGCTG
CTCTACAGCC GCCACTACAT GCACCGCGAG GCGGGCTATA AGCGCTTCTT CAGCACGGTG
CTGTTCTTCT ACGCCGGCTA CGACATGGTG GTGTTCTCGG GGAACATGGA AACCATGTTC
ACCGGCTGGG AAGTGCTGGG GATCACCTCG TTCCTGCTGA TCGCCTTCTA CCGGGACCGC
TACCTGCCGG TGAAGAACGC GGTCAAGGTG TTCTCCATCT ACCGGATCGG CGATGTCGGC
CTGCTGCTGG CGATGTGGAT GATGCACCAC CTGTTCCACG CCAACGTCAG CTTCCACATG
CTCGAAGACC GGGCCTTCGT GCTCGAACAC TTGCAGCCGC ACTCCCTGGT CGGCGTGTTC
ATGGCGCTGA TGATCCTGGT GGCCGCCGCC GCCAAGTCGG CGCAACTGCC GTTCTCCAGT
TGGCTGCCGC GGGCCATGGA GGGACCGACG CCGTCGAGCG CGATTTTCTA CGGCTCGCTG
TCGGTGCACA TCGGGGTCTT CCTGTTGCTG CGCACCGCGC CGCTCTGGCG CGACCAGCCG
TCCGTCTGCC TCGTCGTCGG CCTGCTGGGC GCCTCCACCA GCATCGTCGC GACGGTGATC
GCCCGCTCGC AGTCGGCGAT CAAGAGCCAG ATCGCCTACG CCTCCATCGC CCAGATCGGT
CTGATCTTCA TCGAGATCGC CGCCGGTTTC GACGCCCTGG CCCTGGTGCA CTTCGCCGGG
AACGCCTTCC TGCGCACCTA CCAACTGCTG GTTTCGCCGT CGGTGGTGGC CTACTTGATC
CGCGAGCAGT TCTACAACTT CGTGCCGCGG CAACACCATG CCAGGTGGGT GCTGCCGAAG
AAGTTCATGT ATTCGCTCTA CATGCTCTCG GTGCGCGAGT TCGACCTGGA TGCCTTCATG
TACCGCAGGT TGTGGAACCC CATGAAGAAT CTGGGGCGGC GCCTGGACTT CCTGACCTTC
TGGCGGGTCG TCGGCATCTT CGTGCCGGTC TATCTGCTGG GGCTGTTCCT GGTCTACAAC
CGTGAGGCGT TGCCCGGCGC GGTCACGGAA ATCCTGCCGG TGATCTTCGC GGCGATGGCG
GCGGTGCTGG TGCTCAAGTC CTTCACCGAG CGCCGGCGCG CCCGGATGGC CTGGCTGCTG
GCGATCCTGA CGCACTTCTG GATCGCCCTG GCCACTTCCT TCAACGCCGA CTTCGGCTTC
AGCGAAAGTT ACCTTTACCT GAGCGGCGTG GCCCTGGCCG GAGTCGTCGG ACTTCTCTGC
CTGCGGCGAC TCAAGCATCT CGAAGGCGAT ATCGATCTCG ACCGCTTCCA TGGCCATTGC
CGGCAGCATC CGAAGATCGC TTTCGTATTT CTGCTGAGTT GCCTGTGCGC CACCGGTTTT
CCGATCAGCC CGACGTTCAT CGGCGAAGAC CTGATGTTCG CGCATATCGA GGAAGGGCAG
ATCGGATTGG CCTTTTTGAC CAGCTTCAGT TTCGTCCTGG TCGGCCTGTC GATCATCCGC
ATCTACGCGC GGGTATTTCT CGGACCACAT GCCAAGTCGG TCTACGAGGT GGCCTACAAG
TCTTCCTGA
|
|---|
| Protein sequence | MASALQIFIF LPLIGFLISL IHPERDEKRI SRTALVTVGV NLAGFVLFLA YWALRGFPTL
ELKDFVLFHT DSYEFYIDFL FDRITATYVL VGTFLTFMVL LYSRHYMHRE AGYKRFFSTV
LFFYAGYDMV VFSGNMETMF TGWEVLGITS FLLIAFYRDR YLPVKNAVKV FSIYRIGDVG
LLLAMWMMHH LFHANVSFHM LEDRAFVLEH LQPHSLVGVF MALMILVAAA AKSAQLPFSS
WLPRAMEGPT PSSAIFYGSL SVHIGVFLLL RTAPLWRDQP SVCLVVGLLG ASTSIVATVI
ARSQSAIKSQ IAYASIAQIG LIFIEIAAGF DALALVHFAG NAFLRTYQLL VSPSVVAYLI
REQFYNFVPR QHHARWVLPK KFMYSLYMLS VREFDLDAFM YRRLWNPMKN LGRRLDFLTF
WRVVGIFVPV YLLGLFLVYN REALPGAVTE ILPVIFAAMA AVLVLKSFTE RRRARMAWLL
AILTHFWIAL ATSFNADFGF SESYLYLSGV ALAGVVGLLC LRRLKHLEGD IDLDRFHGHC
RQHPKIAFVF LLSCLCATGF PISPTFIGED LMFAHIEEGQ IGLAFLTSFS FVLVGLSIIR
IYARVFLGPH AKSVYEVAYK SS
|
|---|
| |