Gene Avin_16900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16900 
Symbol 
ID7760625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1677798 
End bp1678667 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID643804589 
ProductRNA binding protein, S1 family 
Protein accessionYP_002798879 
Protein GI226943806 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCCC CGGCAAGCAA GGTATTCAAG ATGGCACTCA TCGGACGGTT CAACTCCCTG 
CAGGTGGTCA AGCACACTGA TTTCGGCCTC TATCTCGACG ACGGCGAGGA CGGCGAAATC
CTTCTGCCCC GGCGTTATGT GCCCAGGGAC CGGCCGAGCG AGGTCGGCGA CCGGCTCGAC
GTCTTCGTCT ACCTGGACAG CGACGACCGG CTCATCGCCA CCACCCTGCG GCCGAAGATC
CAGGTCGGTG GCTTCGCCAG CCTCAAGGTG GTGCAGATCG ACCGCGTCGG CCTGTTCCTC
GACTGGGGCC TGCCCAAGGA CCTGCTGCTG CCCCATTCCG AAGAGAAACG CCCGCTGCAG
GTCGGCGATC ACTGCGTGGT CCACGCCTAC CTCGACGCGC GCACCCGGCG CATCGTCGCC
ACCGCCCGGC TCGACCGCTA TCTGGACCGG ACTCCGCCCG ACTACCGGCC CGGCCAGGCC
GTCGAGCTGC TGGTGGTCGA GCAGACCCCG CTGGGCTTCA AGGCGATCGT CGAAGGCCGG
CACTGGGGGC TGATCCACAG GAACGAGCTG TTCAAGCCCG TTCGCCCCGG CATGCGCGAA
CGGGGCTACA TCAGGGACGT GCGCGCCGAC GGCAGGATCG GCCTGACACT GCAACCGGCC
GGCCAGGCCG CTCGCGACGA ACTGGCCGAA CGCATCCTCG CGCGGCTGGA CGAGGAGGGC
GGCACGCTGC CCTTCGGCGA CAAGACCCCG CCGGAACGCA TCGCCCAACT GTTCGGCGTC
AGCAAGGGCA CCTTCAAGAA GGCCATCGGC GGCCTCTACA AGCAGGGCCT GATCGTCATC
CATGACGACC GCATCGAACG CAGCCGATGA
 
Protein sequence
MPAPASKVFK MALIGRFNSL QVVKHTDFGL YLDDGEDGEI LLPRRYVPRD RPSEVGDRLD 
VFVYLDSDDR LIATTLRPKI QVGGFASLKV VQIDRVGLFL DWGLPKDLLL PHSEEKRPLQ
VGDHCVVHAY LDARTRRIVA TARLDRYLDR TPPDYRPGQA VELLVVEQTP LGFKAIVEGR
HWGLIHRNEL FKPVRPGMRE RGYIRDVRAD GRIGLTLQPA GQAARDELAE RILARLDEEG
GTLPFGDKTP PERIAQLFGV SKGTFKKAIG GLYKQGLIVI HDDRIERSR