| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15930 |
|---|
| Symbol | rfbD |
|---|
| ID | 7760528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1568801 |
|---|
| End bp | 1569700 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643804493 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_002798783 |
|---|
| Protein GI | 226943710 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TGCTACTGGG AGCCAACGGT CAGGTTGGCT GGGAACTGCA ACGGGCCCTG
GCGCCGTTGG GGCGGCTGGA GATCTGCGAT CGTCTCCGGG CCGATCTGGA CAGGCCGGAA
AGCCTGGCCG CGCTGGTCGA GCGAATTCAG CCGCAGGTCA TCGTCAATGC CGCCGCCTAT
ACCGCCGTGG ACAAGGCCGA ATCCGACGCG GCTCGCTCGC GTCGGGTGAA CGCCGAATCG
GTGGAAGTGC TGGCGGATGC CGCGCGAAGT TGCGATGCCT GGCTGGTGCA TTACTCGACC
GACTATGTGT TCGATGGCTG CAAAGCCGCG GCCTATACGG AAGATGACCC CGTGGGGCCG
CTGAGCGTCT ACGGGCAGAC GAAGCTGGAG GGCGAACAAG CTATTCAGGC TTCCGGGTGC
AAGCACCTGA TCCTGAGAAC CAGTTGGGTG TACGCCGCAC GCGGCAGCAA CTTCATCAAG
ACCATGCTGC GCCTGGCCGC CGAGCGCGAA GAACTGCGTG TGATCGCCGA TCAGATCGGA
GCACCGACCA GCGCCGAACT GATCGCCGAT GTGAGCGCTC TGCTTTTGTA TCGGTTGAGG
CATGATCGGG CATTGGCCGA GCAGGCAACG GGGGTCTATC ACCTGACTGC CGCCGGCGAA
ACCAGTTGGC ATGGCTACGC GCGTTTCGTC GTGGCCAAGG CTGCCGCATT GGATATGTCA
CTCAAGGCGG GGCCCGACGA CATCCATGCG ATCGGTACCG CCGATTACCC GCTGCCGGCC
CGGCGCCCGG CCAACTCCCG GCTCGATACC GGCAAACTCC GACGTACCTT CGATCTGCAT
CTTCCACAGT GGGAATATCA CGTCGAACGC ATGCTGCACG AGCTCCTCGC CAAACCATAG
|
|---|
| Protein sequence | MKILLLGANG QVGWELQRAL APLGRLEICD RLRADLDRPE SLAALVERIQ PQVIVNAAAY
TAVDKAESDA ARSRRVNAES VEVLADAARS CDAWLVHYST DYVFDGCKAA AYTEDDPVGP
LSVYGQTKLE GEQAIQASGC KHLILRTSWV YAARGSNFIK TMLRLAAERE ELRVIADQIG
APTSAELIAD VSALLLYRLR HDRALAEQAT GVYHLTAAGE TSWHGYARFV VAKAAALDMS
LKAGPDDIHA IGTADYPLPA RRPANSRLDT GKLRRTFDLH LPQWEYHVER MLHELLAKP
|
|---|
| |