Gene Avin_15680 details

Gene Information

• Locus tag: Avin_15680
• Symbol: edd-1
• ID: 7760503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1538026
• End bp: 1539852
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643804468
• Product: phosphogluconate dehydratase
• Protein accession: YP_002798758
• Protein GI: 226943685
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase; [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCCCC GAGTCCTCGA AGTCACCCAG CGGCTGACCG AGCGCAGCCG CGCCACTCGC 
GAGCGCTATC TCGAGCAGAT GCGCCGCGCT GCCGCCGAGG GGCCGTCGCG CGCGCGGCTG 
CCTTGCGCCA ACTTCGCCCA TGGCGTGGCC GGTTGCGCCG AGTCCGACAA GCAGCGCCTG 
CGTCTGCCCG GCGAAGTCGG CGTGGCGATC GTCTCGGCCT ACAACGACAT GCTCTCGGCG 
CACCAGCCCT ACCAGCACTT TCCGCCGCTC CTCAAGGCCG CGCTGCAGGA GATCGGTGCG 
GTCGGCCAGT TCGCCGGCGG GGTGCCGGCG ATGTGCGACG GCGTCACCCA GGGCGAGGCG 
GGCATGGAGT TGAGCCTGGC CAGCCGCGAT GTGATCGCCA TGGCCATCGC GGTGGCGCTG 
TCCCACAACA TGTTCGACGC GGCGCTGTGC CTGGGGATCT GCGACAAGAT CGTCCCCGGC 
CTGGTGATAG GGGCGCTGCG TTTCGGCCAC CTGCCGTTCG TCTTCGTCCC GGGCGGGCCG 
ATGCCCTCGG GCATCCCCAA CAAGGAAAAG GCGGAAACCC GCCAGCGCTA TGCCGAAGGC 
AAGGCCAGCC GCGCGGAACT GCTCGAGTCG GAGATGAAGT CCTATCACAG CCCCGGAACC 
TGCACCTTCT ACGGCACGGC GAACACCAAT CAGGTGCTGA TGGACGTGGT CGGCCTGCAT 
CTGCCGGGCG CCGCCTTCGT CAACCCGTAC ACGCCGCTGC GCGACGCGCT GACCTGCGAG 
GCGGCCCGCC AGGCGACGCG GCTGACCCGG CAGGCCGGCG ACTACCTGCC GCTGTGCGAG 
ATCTTCGACG AGAAGGCGGC GATCAACGCG GTGGTGGCGC TGCTCGCCAC CGGCGGCTCG 
ACCAACCACA GCCTGCACCT GCCGGCCATG GCCCTGGCCG CCGGCATCCG CCTGACCTGG 
CAGGACATGG CCGACCTGTC CGAGGTGGTG CCGCTGATCG CCAGGGTCTA TCCCAATGGC 
CAGGACGACG TGAACCGCTT CCACGCTGCC GGCGGCACGC CTTTCCTGAT CCGCGAACTG 
CTCGGCGCCG GGCTGCTGCA CGAGGACGTC AACACCGTGC TCGGGCGCGG ACTGGGCCGC 
TACACCCAGG AGCCGTTTCT GGACGAGGGG CGACTGGTCT GGCGCGAGGG CCCGGCGCAG 
AGCCTCGACG AGAGCATCCT GCGCCCGGTG GCCCGGCCGT TCTCCGCCGA AGGCGGCCTG 
CGCGTGCTGG AGGGCAATCT GGGGCGCGGC GTGATCAAGG TCTCCGCGGT GGCGCCGGAG 
CATCGGGTGG TCGAGGCCCC GGCGCGGGTC TTCGCCAGCC AGGCCGAACT GGCCGCGGCC 
TTCCAGGCCG GCGAACTGGA GCGCGACCTG GTGGCGGTGG TGCGCTTCCA GGGGCCGAAG 
GCCAACGGCA TGCCCGAACT GCACAAGCTC ACGCCTTATC TGGGGGTGCT GCAGGATCGT 
GGCTACCGTG TCGCGCTGGT CACCGACGGG CGCATGTCCG GGGCTTCCGG CAAGGTCCCG 
GCGGCCATCC ATGTCTGTCC CGAGGCGCAG GAGGGCGGGC CGCTGGCGCG CTTGCGCGAC 
GGCGATCCGA TCCGCGTGGA TGGTGAAAAG GGCGAACTGA AGGTACTGCT GCCGGAGGCG 
GAATGGGCGG CGCGGGAGAG CGTCGCGGCC CCGGAGGATG CCGGCATCGG TTGCGGCCGC 
GAGCTGTTCG CTTTCATGCG CGCGGCCTTC AGTTCGGCGG AAGAGGGCGC CTGCGTGTTC 
ACCGAGCGGC TCGGAGCGCT CGAATGA 

 

Protein sequence

MHPRVLEVTQ RLTERSRATR ERYLEQMRRA AAEGPSRARL PCANFAHGVA GCAESDKQRL 
RLPGEVGVAI VSAYNDMLSA HQPYQHFPPL LKAALQEIGA VGQFAGGVPA MCDGVTQGEA 
GMELSLASRD VIAMAIAVAL SHNMFDAALC LGICDKIVPG LVIGALRFGH LPFVFVPGGP 
MPSGIPNKEK AETRQRYAEG KASRAELLES EMKSYHSPGT CTFYGTANTN QVLMDVVGLH 
LPGAAFVNPY TPLRDALTCE AARQATRLTR QAGDYLPLCE IFDEKAAINA VVALLATGGS 
TNHSLHLPAM ALAAGIRLTW QDMADLSEVV PLIARVYPNG QDDVNRFHAA GGTPFLIREL 
LGAGLLHEDV NTVLGRGLGR YTQEPFLDEG RLVWREGPAQ SLDESILRPV ARPFSAEGGL 
RVLEGNLGRG VIKVSAVAPE HRVVEAPARV FASQAELAAA FQAGELERDL VAVVRFQGPK 
ANGMPELHKL TPYLGVLQDR GYRVALVTDG RMSGASGKVP AAIHVCPEAQ EGGPLARLRD 
GDPIRVDGEK GELKVLLPEA EWAARESVAA PEDAGIGCGR ELFAFMRAAF SSAEEGACVF 
TERLGALE