Gene Avin_15090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15090 
SymbolmhpR 
ID7760444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1486322 
End bp1487143 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID643804406 
ProductDNA-binding transcriptional activator MhpR 
Protein accessionYP_002798699 
Protein GI226943626 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.774699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG AACACGATAC CGAATACAAG ACCGTGCGTG GCCTGAGCCG CGGCCTGCAG 
ATCCTCAACG CCCTCAACCG GGTGGATGGC GGCGCCAGCC CGACGAAGCT GGCCGAGCTG
ACCGGACTGC ACCGCACCAC GGTGCGCCGC CTGCTGGAGA CGTTGCAGGA CGAAGGCTAT
GTGCGACGCA GCGAGTCGGA CGACAGCTTC CGCCTGAGCA TGAAGGTGCG CGAGCTGAGC
GAGGGCTTTC GCGACGAGCA GTGGATTTCC GCGCTGGCCG CGCCGCTGCT GGCCGAGTTG
CTGCAGGAGG TGGTCTGGCC GACCGACCTG TGCACCCTGG ACGTGGACGC CATGGTGGTG
CGCGAGACCA CCCACCGCTT CAGCCGGCTG TCGTTCCATC GTTCGATGGT CGGCCGGCGC
ATGCCGATAC CGCTCACCGC CACCGGCCTC GCCTATCTCG CCTTCTGCCC GGACGCCGAA
CGCGAGCGCA TCGTCGAACT CCTGGCCAGC CGCGACGACG AGGAAGGCCG CCTGGCGCGC
GACCGTGCGG GCCTGGACAA CCTGCTGCGA CGCACGCGCC ACCGCGGTTA CGGCGAGAAC
TACGGCAGTT GGAACAGCGA GGAAAGGATC GCCGCCATCG CCGTGCCGAT CCGTGGCGAG
CAGCGGGTCT ACGGCTGTAT CAGTCTGATC TACGTGGCCA AGGCGATGAC CATCGAGCAG
GCCGCGAAAC GCTACCTGCC GGCCCTGCAA CGCTTCGCGG CCACCGTCGA ACAGGGCATC
CACGAGCGCG AACAGGCCGG ACCGGCGCTG ACGGGCAACT GA
 
Protein sequence
MSSEHDTEYK TVRGLSRGLQ ILNALNRVDG GASPTKLAEL TGLHRTTVRR LLETLQDEGY 
VRRSESDDSF RLSMKVRELS EGFRDEQWIS ALAAPLLAEL LQEVVWPTDL CTLDVDAMVV
RETTHRFSRL SFHRSMVGRR MPIPLTATGL AYLAFCPDAE RERIVELLAS RDDEEGRLAR
DRAGLDNLLR RTRHRGYGEN YGSWNSEERI AAIAVPIRGE QRVYGCISLI YVAKAMTIEQ
AAKRYLPALQ RFAATVEQGI HEREQAGPAL TGN