Gene Avin_14540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14540 
Symbol 
ID7760390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1433614 
End bp1434597 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID643804352 
Productbeta-hexosaminidase 
Protein accessionYP_002798645 
Protein GI226943572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGACA TCGCCGGCAC CTGGCTGACC GCCGAGGATC GCCAGTTGCT GCGCCAGCCC 
GAGGTAGGCG GCCTGATTCT GTTCGCCCGC AATATCGAGC ACCCGGCCCA GGTCCGCGAA
CTCTGCGCGG CGATCCGTGC CGAGCGCCCC GACCTGCTGC TCGCCGTGGA TCAGGAGGGC
GGCCGTGTGC AACGCCTGCG CCAGGGTTTC GTGCGTTTGC CGGCGATGGG GGCGCTGGCC
GCACATGGGG AGGACGAACG GCTGGCCGAG GAGTGCGGCT GGCTGATGGC GACCGAGGTG
CTGGCAGCCG GGCTGGATTT CAGTTTCGCG CCGGTGCTGG ATCTCGATCA TGGGCGTAGC
GCGGTGATCG GCTCGCGCGG CTTCGCCGGC GAACCGGAGG CGGTCGTCCG CCTGGCCGGG
GCCTTCGTCC GTGGCATGCA TGCCGCCGGC ATGGCCGCTA CTGGCAAGCA TTTCCCCGGC
CATGGCTGGG CGGAAGCCGA TTCCCATGTT GCCATCCCCA CCGACGAGCG CAGTCTCGAT
GCGATCCGCG CTCAGGATCT GCTGCCCTTC CAGCGCCTCG GCGGCCAACT GGATGCGCTG
ATGCCGGCGC ACGTCATCTA TTCGCAGGTC GATGAGCAGC CGGCCGGCTT CTCCCGCCGC
TGGCTGCAGG ACATCCTGCG CGGCGAGCTG GGCTTCGGCG GGGTGGTGTT CAGCGACGAC
CTGTCGATGG CCGGCGCCCA TGTGGCCGGC GATGCGGCCG CACGGATCGA GGCGGCGCTC
GCCGCCGGTT GCGACATAGG ACTGGTATGC AACGACCGGG CGGCGGCCGA ACTGGCCCTG
TCCGCCCTGC AGCGCCTCGA CGCGAAGCCG TCGCCGCGCC TGGCGGGGAT GCGCCGGCGA
GCCTTCCCTG GCGTCGATTA CAAGCAGAAC CCACGCTGGC TGCGCGCGCT CGAGAGTCTG
CGCCAGGCCC GGCTGATCGA TTGA
 
Protein sequence
MLDIAGTWLT AEDRQLLRQP EVGGLILFAR NIEHPAQVRE LCAAIRAERP DLLLAVDQEG 
GRVQRLRQGF VRLPAMGALA AHGEDERLAE ECGWLMATEV LAAGLDFSFA PVLDLDHGRS
AVIGSRGFAG EPEAVVRLAG AFVRGMHAAG MAATGKHFPG HGWAEADSHV AIPTDERSLD
AIRAQDLLPF QRLGGQLDAL MPAHVIYSQV DEQPAGFSRR WLQDILRGEL GFGGVVFSDD
LSMAGAHVAG DAAARIEAAL AAGCDIGLVC NDRAAAELAL SALQRLDAKP SPRLAGMRRR
AFPGVDYKQN PRWLRALESL RQARLID