| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_14340 |
|---|
| Symbol | |
|---|
| ID | 7760370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1410918 |
|---|
| End bp | 1414031 |
|---|
| Gene Length | 3114 bp |
|---|
| Protein Length | 1037 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643804332 |
|---|
| Product | acriflavin resistance protein AcrB/AcrD/AcrF family |
|---|
| Protein accession | YP_002798625 |
|---|
| Protein GI | 226943552 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.358692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTT CCGGTCTTTT CATCCGCCGG CCGATCGCCA CCCTGCTGAT CATGCTGGCG
GTGCTGCTGA GCGGTCTGCT GGCCTATCGC ATCTTGCCCA TCGCGGCGCT GCCGCAGGTG
GACTACCCGA CCATCCAGGT GACCACCTTC TACCCCGGCG CCGGGCCGCA GGTGATGCTC
ACCGCCGTCA CCGCGCCGCT GGAGCGGCAA CTGGGGCAGA TGTCCGGCCT GAGCCAGATG
TACTCGACCA GTTCCGGCGG CGCCTCGGTC ATCACCCTGA AGTTCAACCT CGACCTGTCG
CTGGACGAGG CCGAACAGGA GGTGCAGGCG GCGATCAACG CCGCCGACAG CCTGCTGCCC
AGCGACCTGC CCAATCCGCC GACCTACAAG AAGGTCAACC CGGCCGATTC GGCGGTGCTG
ACCCTGGCGG CCAGTTCGGA GAGCCTGCCG CTGATCGAGG TGCAGGACCT GATCAACACG
CGCATCGCCC TCAAGCTGTC CCAGGTGTCC GGGGTCGGCC TGGTCAGCCT GGCCGGCGGC
CAGCAGTCGG CGATCCGCAT CCGCGTCGAT CCGGTCGCCC TGGCCGCCCA CGGCCTGGCG
CCGGAAAACG TCTACGAACT GGTCAACGGC GCCAACGTCA ACGGTTCCAA GGGCGGCTTC
GACGGCCCCG ACCACTCGGT CACCATCGAC GCCAACGACC AGTTGCGCAG CGCCGCGGAA
TACGCCGAGC TGGTGCTGAC CTACGAGGAC GGCAAGGCGC TGCGCCTGCG CGACGTGGCC
AGCCTCGACG AGGCGCCGGA GAACCTCTAC CAGCGCGCCT GGGCCGGTGC GAAGCAGGCC
ATCGTCATCA ACATCCAGCG CCAGCCCGGC GCCAACGTGA TCCAGGTGGT GGACAGCATC
GAGGCGCTGC TGCCCAGCCT GCGCGACAGC CTGCCCGGCG CCGTGGAGCT GGAGGTGCTG
GCCGACCGCA CCCAGACCAT CCGCGCCTCG GTCGAGGACG TGCAACTGGA GCTGATCCTG
TCGGTCGCCC TGGTGGTGCT GGTGTCGTTC ATCTTCCTGC GCAACCTGGC CGGCACCCTG
ATCCCCAGCG TGGCGGTGCC GCTGTCCTTG ATCGGCAGCT TCGGGGTGAT GTACCTGGCC
GGCTTCTCGC TGAACAACCT GACGCTGATG GCCCTGACCA TCGCCACCGG CTTCGTGATC
GACGACGCCA TCGTGGTGGT GGAGAACATC CAGCGCCACC TGGAAGAGGG CGAGCCGCCG
CTGCAGGCGG CGCTCAAGGG CTCGGCGGAG ATCGTCTTCA CCGTGGTTTC GCTGACCCTC
TCGCTGATCG CCGTGCTGAT TCCGCTGCTG TTCATGGGCG ACGTGGTGGG CCGGCTGTTC
CGCGAATTCT CCATCACCCT GGCGGTGTCG ATCCTGGTGT CGATGTTCGT CTCGCTGACC
CTCACGCCGA TGCTCTGCGC CTACCTGCTG CGGCACATCC CGGCGGCGGA GGAGAGCCGC
TTCTCGCGCT GGGGCGGCTT GCAGTTCGAA CGGCTGGTGG CCGTCTACGA CCGGGCGCTG
CGCTGGGTGC TGGCGCACCA GGGCTTCACC CTGCTGGTGG CGGTTTCCAC CCTGGCGCTG
ACCGCGGCGC TGTACCTGTT CGTGCCCAAG GGTTTCTTCC CGATCCAGGA CACCGGCCAG
TTGCAGGGCA TCGTCCAGGC GCCGCAGAAC GTCTCCTTCG AGGAGATGAG CCGGCGCCAG
CAGGTGCTGG TGGAGGTGCT GCGCGCCGAT CCGGCGGTCG CCTCGCTGTC TTCCATCGTC
GGCGTGGACG GCAGCAACGT CTCCCTGAAC ATGGGCCGCC TGCAGATCGA GCTGAAACCC
TTCGCCGAGC GCGACGAGCG GGCCGACGCG GTGATCGAGC GGATGCGCCG GGCCGCCGCT
CAAGTGACCG GGGTCAGCCT GTACCTGACC GCCAGCCAGG ATCTGAGCGT CGACGACCAG
GTCACCCCCA GCCGCTATCA ACTGACCCTG GACACGCCGG TGCTGGCCGA CCTGGAAACC
TGGGTGCCGC GCCTGCTGGA GCGGCTCAGG GCGCGCCCGG AACTGCGGGA CGTGGTCAGC
GGCCTGCAGA ACGCCAGCCC GGTCGCCTAC CTGCAGATCG ACCGGGCGGC GGCGGCCCGC
TACGGGATCA GCGCCAGCGA CGTGGACACG GCGCTGTACA ACGCCTTCGG CCAGCGGCTG
ATCTCGACCA TCTTCACCCA GGCCAACCAG TACCGGGTGG TGCTGGAGGT GGCGCCGGCC
TTCCGCCGGG GACCGGCCGA CTTCGAGCGC GTCTACCTGA CCGGCAGCGC CACGGACGAC
TCCACCGACG GCGAGACGCC CATGGTGCGC CTGAGCAACA TCGCCAGCCT GCGCGAGCGG
ACCGGCCACC AGTCGCTGGC GCGCCTGAAC CAGACGCCCG CGGTGACCCT GTCGTTCAAC
CTGGCGCCGG GCTACTCGCT GGAGCAGGCG CGCCAGGCGG TCGGCGAGGC CTGCGCCGCC
ATCGGCCTGC CGGAAAGTAT CACCCTGCGC TACCAGGGTG CCGCCGACGC CTTCGCCACG
GCCACCGGCA ACACCCTGTG GCTGATCCTG GCGGCGCTGG TCACCATGTA CATCGTGCTC
GGCGTGCTCT ACGAGAGCTG GATCCATCCG GTCACCATCC TCTCCACCCT GCCGTCGGCG
GCCATCGGCG CGCTGCTGGC CCTGCTGGCC AGCGACAGCG AGTTCGGCCT GATCGCGCTG
ATCGGGGTGA TCCTGCTGAT CGGCATCGTC AAGAAGAACG CCATCATGCT GATCGACTTC
GCCCTCGACC GGCAGCAGCG CGGGCTGGCC GCCCGCGAGG CGATCCACGA GGCCTGCCTG
CTGCGCTTCA GGCCGATCCT GATGACCACC CTGGCCGCGT TGCTCGGCGC CCTGCCGCTG
ATGCTGGCCC AGGGCGCCGG GGCCGAGCTG CGCCGGCCGC TGGGGCTGGT GATCGTCGGC
GGGCTGCTGC TCAGCCAGTT GCTGACCCTG TTCACCACGC CGGTGATCTA CCTGCTGTTC
GAGCGCCTGG CGCAGCGCCG CCGCCGCCAC GCGGCGGCCG GTGAGCCGGC ATGA
|
|---|
| Protein sequence | MNPSGLFIRR PIATLLIMLA VLLSGLLAYR ILPIAALPQV DYPTIQVTTF YPGAGPQVML
TAVTAPLERQ LGQMSGLSQM YSTSSGGASV ITLKFNLDLS LDEAEQEVQA AINAADSLLP
SDLPNPPTYK KVNPADSAVL TLAASSESLP LIEVQDLINT RIALKLSQVS GVGLVSLAGG
QQSAIRIRVD PVALAAHGLA PENVYELVNG ANVNGSKGGF DGPDHSVTID ANDQLRSAAE
YAELVLTYED GKALRLRDVA SLDEAPENLY QRAWAGAKQA IVINIQRQPG ANVIQVVDSI
EALLPSLRDS LPGAVELEVL ADRTQTIRAS VEDVQLELIL SVALVVLVSF IFLRNLAGTL
IPSVAVPLSL IGSFGVMYLA GFSLNNLTLM ALTIATGFVI DDAIVVVENI QRHLEEGEPP
LQAALKGSAE IVFTVVSLTL SLIAVLIPLL FMGDVVGRLF REFSITLAVS ILVSMFVSLT
LTPMLCAYLL RHIPAAEESR FSRWGGLQFE RLVAVYDRAL RWVLAHQGFT LLVAVSTLAL
TAALYLFVPK GFFPIQDTGQ LQGIVQAPQN VSFEEMSRRQ QVLVEVLRAD PAVASLSSIV
GVDGSNVSLN MGRLQIELKP FAERDERADA VIERMRRAAA QVTGVSLYLT ASQDLSVDDQ
VTPSRYQLTL DTPVLADLET WVPRLLERLR ARPELRDVVS GLQNASPVAY LQIDRAAAAR
YGISASDVDT ALYNAFGQRL ISTIFTQANQ YRVVLEVAPA FRRGPADFER VYLTGSATDD
STDGETPMVR LSNIASLRER TGHQSLARLN QTPAVTLSFN LAPGYSLEQA RQAVGEACAA
IGLPESITLR YQGAADAFAT ATGNTLWLIL AALVTMYIVL GVLYESWIHP VTILSTLPSA
AIGALLALLA SDSEFGLIAL IGVILLIGIV KKNAIMLIDF ALDRQQRGLA AREAIHEACL
LRFRPILMTT LAALLGALPL MLAQGAGAEL RRPLGLVIVG GLLLSQLLTL FTTPVIYLLF
ERLAQRRRRH AAAGEPA
|
|---|
| |