Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_13740 |
Symbol | lepA |
ID | 7760312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1335800 |
End bp | 1337599 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643804269 |
Product | GTP-binding protein LepA |
Protein accession | YP_002798568 |
Protein GI | 226943495 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGACC TCAGTCATAT CCGCAATTTC TCCATCATCG CCCATATCGA TCATGGCAAG TCGACACTGG CAGACCGATT CATTCAGATC TGTGGCGGCC TTTCCGAGAG GGAAATGGAG GCTCAGGTTT TGGACTCCAT GGATCTTGAG CGCGAACGTG GCATCACCAT CAAGGCCCAC AGCGTGACCC TGCATTACAA GGCGCAGGAC GGCAAAACCT ATCAGTTGAA TTTTATCGAT ACGCCCGGTC ATGTCGATTT CACTTACGAA GTCAGCCGTT CCCTGGCTGC CTGCGAAGGG GCCCTGCTGG TAGTGGATGC CGGTCAAGGG GTAGAGGCCC AGTCGGTCGC TAATTGCTAT ACGGCTATCG AGCAGGGGCT GGAGGTGATG CCGGTGCTGA ACAAGATGGA CCTGCCCCAG GCAGAGCCGG AGCGGGTCAA GGATGAGATC GAGCACATCA TCGGCATAGA TGCCGGCGAT GCGGTCTTGT GCAGTGCGAA AAGCGGAATG GGTGTGCCCG ATGTGCTCGA GCATCTGGTC CGGGTCATTC CTCCGCCCCA AGGCGAAATC GAAGCGCCGC TGCAGGCGCT GATCATCGAC TCCTGGTTCG ACAACTACCT GGGCGTGGTT TCGCTGGTGC GGGTCAAGCA CGGCCGAGTG AAGAAGGGTG ACAAGATTCT GGTGAAGTCC ACCGGTAAGG TCCATCAGGT GGACAGCGTC GGGGTTTTCA CCCCAAAGCA CACCGAGATG CCTGATCTCA AGGCGGGTGA GGTGGGTTTC ATCATCGCCG GCATCAAGGA CATTCACGGT GCACCGGTAG GCGACACCCT GACGCTATCC AGCACTCCCA ATGTGGATAT GCTGCCAGGT TTCCAACGAA TCAAGCCGCA GGTCTATGCA GGACTGTTTC CGGTCAGCTC GGATGATTTC GAAGATTTCC GCGAGGCATT GCAGAAGCTG ACGCTTAATG ATGCTGCGCT GCAGTATGAG CCAGAAAGTT CGGATGCGCT CGGTTTCGGA TTCCGCATCG GTTTCCTTGG CATGCTGCAT ATGGAAATCA TCCAGGAGCG CCTGGAGCGC GAATATGACC TGGATCTGAT CACCACAGCG CCGACGGTGG TCTATGAAGT CCTGCTGAAG AATGGCGATA CGATATGTGT CGACAATCCG TCGAAGTTAC CGGACCTGGC TTCCATTGCC GAAATGCGTG AGCCGATCGT TCGCGCCAAT ATTCTGGTGC CGCAGGAACA TCTGGGTAAT GTCATCAATC TGTGCATCGA GAAGCGTGGT GTCCAACGCG ACATGCAGTT CCTCAGTAGC CAGGTCCAGA TCAGTTACGA CTTGCCGATG AACGAGGTGG TACTGGATTT CTTCGACCGC TTGAAGTCGG TCAGCCGTGG CTATGCCTCG CTGGATTACA GTTTCGATCG CTTTCAGGTT GCCAATCTGG TCAAGCTGGA CGTCCTTATC AATGGCGACA AGGTGGATGC CCTGGCGCTC ATCGTGCATC GCGACAAGGC TCACCAGAAG GGGCGGGCAC TTACCGAGAA GATGAAGGAA CTGATTCCTC GGCAGATGTT CGATGTGGCC ATCCAGGCCG CCATTGGCGG ACAGGTAGTG GCACGGACCA CGGTCAAGGC GCTGAGAAAG AATGTCCTGG CAAAATGCTA TGGCGGCGAT GTGACGCGTA AGCGCAAATT GCTGGAGAAG CAGAAGGCCG GCAAGAAGCG GATGAAGCAG GTTGGTAGTG TCGAAATTCC ACAGGAAGCT TTCCTTGCTG TGCTCAAGGT AGATAGTTAG
|
Protein sequence | MSDLSHIRNF SIIAHIDHGK STLADRFIQI CGGLSEREME AQVLDSMDLE RERGITIKAH SVTLHYKAQD GKTYQLNFID TPGHVDFTYE VSRSLAACEG ALLVVDAGQG VEAQSVANCY TAIEQGLEVM PVLNKMDLPQ AEPERVKDEI EHIIGIDAGD AVLCSAKSGM GVPDVLEHLV RVIPPPQGEI EAPLQALIID SWFDNYLGVV SLVRVKHGRV KKGDKILVKS TGKVHQVDSV GVFTPKHTEM PDLKAGEVGF IIAGIKDIHG APVGDTLTLS STPNVDMLPG FQRIKPQVYA GLFPVSSDDF EDFREALQKL TLNDAALQYE PESSDALGFG FRIGFLGMLH MEIIQERLER EYDLDLITTA PTVVYEVLLK NGDTICVDNP SKLPDLASIA EMREPIVRAN ILVPQEHLGN VINLCIEKRG VQRDMQFLSS QVQISYDLPM NEVVLDFFDR LKSVSRGYAS LDYSFDRFQV ANLVKLDVLI NGDKVDALAL IVHRDKAHQK GRALTEKMKE LIPRQMFDVA IQAAIGGQVV ARTTVKALRK NVLAKCYGGD VTRKRKLLEK QKAGKKRMKQ VGSVEIPQEA FLAVLKVDS
|
| |