Gene Avin_12930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12930 
SymbolhisD 
ID7760235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1256248 
End bp1257558 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content64% 
IMG OID643804195 
Producthistidinol dehydrogenase 
Protein accessionYP_002798494 
Protein GI226943421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAT CCCTCGCCCT TCGCCGACTC GACGCTGCCG ATCCGGACTT TCCGCGCCAT 
CTGGATTATT TGCTGAGCTG GGAAAGCGTT TCCGATGAGG CCGTCAATCG ACGCGTGCTG
GATATCCTCC AGGCCGTACG CGAGCGTGGT GATGCTGCCG TAGTCGAGTT CACCCGGCGC
TTCGATAATG TCGAGGCTGG CTCCATGGCC GAACTGATCC TGCCGCGCGA GCGTCTGGAA
CTGGCCTTGA CGCGCATTTC CCCTGAGCAG CGCGAAGCCC TGGAAAAAGC TGCCGGGCGT
GTACGCCTGT ACCACGAGCG GCAGAAGCAG GACTCCTGGA CCTATACCGA AGCCGATGGC
ACCGTGCTCG GTCAGCAGAT CACTCCGCTC GACCGTGCGG GATTGTATGT GCCGGGCGGA
AAGGCGGCTT ATCCATCCTC GGTGCTGATG AATGCCATTC CAGCCAAGGT AGCTGGTGTC
GCGGAGGTGG TGATGGTGGT GCCGACCCCG CGTGGCGAGC TCAACGAACT GGTGCTGGCT
GCCGCCTGCG TGGCAGGCGT CGACCGCGTG TTCACCATCG GCGGAGCCCA GGCCGTGGCT
GCGCTGGCCT ATGGCACCGA GAGTGTGCCG CAGGTGGACA AGATCGTCGG CCCCGGCAAC
ATCTATGTGG CTACGGCCAA GCGCCACGTA TTCGGTCAGG TCGGCATCGA TATGATCGCC
GGCCCCTCGG AGATCCTGGT GGTCTGCGAT GGGCAGAGCG ATCCGGATTG GATCGCCATG
GACCTGTTTT CCCAGGCCGA GCACGATGAG GATGCCCAGT CGATTCTGGT CAGTCCGGAT
GCCGATTTCC TCGAGCGGGT GGCCGAGAGC ATCGCCCGCC TGCTGCCGAC CATGGAGCGC
GCGGAGATCA TCCGTACCTC GTTGGAGGGG CGTGGCGCGC TCATCCGAGT GACCGACCTG
GAACAGGCCA TTGCCGTGGC CAATCGTATC GCCCCCGAGC ATCTCGAGCT GTCGGTAGCC
GATCCGCAGC GCTGGCTGCC GAAGATCCGC CATGCCGGTG CCATCTTCAT GGGGCGCTAT
ACCGCCGAGG CGCTGGGTGA CTATTGCGCC GGTCCCAACC ATGTGCTGCC GACTTCCGGT
ACCGCACGGT TCTCGTCGCC GCTGGGTGTA TACGATTTCC AGAAGCGCTC GTCGATCATC
TTCTGCTCGG CGGCGGGCGC TTCCGAACTG GGTGAGACCG CATCGGTGCT GGCCCGTGGC
GAGTCCCTGA CGGCTCATGC GCGCAGCGCC GAGTACCGGA TCAAGGCGTG A
 
Protein sequence
MTTSLALRRL DAADPDFPRH LDYLLSWESV SDEAVNRRVL DILQAVRERG DAAVVEFTRR 
FDNVEAGSMA ELILPRERLE LALTRISPEQ REALEKAAGR VRLYHERQKQ DSWTYTEADG
TVLGQQITPL DRAGLYVPGG KAAYPSSVLM NAIPAKVAGV AEVVMVVPTP RGELNELVLA
AACVAGVDRV FTIGGAQAVA ALAYGTESVP QVDKIVGPGN IYVATAKRHV FGQVGIDMIA
GPSEILVVCD GQSDPDWIAM DLFSQAEHDE DAQSILVSPD ADFLERVAES IARLLPTMER
AEIIRTSLEG RGALIRVTDL EQAIAVANRI APEHLELSVA DPQRWLPKIR HAGAIFMGRY
TAEALGDYCA GPNHVLPTSG TARFSSPLGV YDFQKRSSII FCSAAGASEL GETASVLARG
ESLTAHARSA EYRIKA