Gene Avin_11000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_11000 
Symbol 
ID7760044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1052515 
End bp1053555 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID643804004 
Producthypothetical protein 
Protein accessionYP_002798306 
Protein GI226943233 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATC CCCGCTTCGA ATACCGGGTC TTCCTGTTTT TGCTGGTGCT GATCTCGGTG 
GCCTTCGTCT GGATCATCCT GCCCTTCTAC GGCGCCATCT TCTGGGCGGC GGTGCTGGCC
ATTCTCTTCC ATCCCCTGCA GATCCGCCTG CAGCGGCACC TCGGCAACCA TCCGAATCTG
TCGGCCTTGC TGACCCTGAT CGTCTGCGTG GTAGTCGCCG TCCTGCCCAT CACCATCGTG
TCCATGCTGC TGATCCAGGA AGGCGCCACC CTCTACAACG AGATCGAGGC GGGCCGGATC
GACTTCGCCG GCATGCTCGA GGGTCTCAAG GCGCAGCTTC CGGAGCCGCT GCAGGCACAG
ATGTCCCGCT TCGGTCTGGA CAGCCGCTAC GACCTGCGCG ACCGGATCGC CAACATCGCC
ATGCAGGGCA GCCAGCTCCT GGCCACCAAG GCCTTCAACA TCGGCCAGAA CACCTTTCAG
TTCATCCTCG GCTTTTTCGT GATGCTCTAC CTGCTGTTCT TCTTCCTCCG CGACGGCACT
GCGCTGGTCG CCCGGATCAG GGAAGCCATA CCCCTCAGCG AAATGAAGAA GTCCCGCCTG
TTCCAGCGCA TCACCGGCAT GGTGCAGGCC ACCATCAAGG GCAGCCTCGT CGTCGCGGTC
ATCCAGGGCA GCCTGGGCGG CGTCATATTC GCCCTGCTGG GCATTCCTCG GGCGTTGCTC
TGGGGGGTCG CCATGGCCTT CCTGTCGTTC CTGCCGGCCT TGGGAACGGG ACTCGTCTGG
GCCCCCGTGG CCATCTATTT CCTGCTCAGC GGCGCGATCC TCAAGAGCGT GCTGCTCACG
GCTTGCGGCA TCTTCATCAT CGGCCTGGTG GACAACATCG TGAGACCCAT CCTGGTGAGC
AAGGACACCC GCCTGCCGGA CTACCTGGTC CTGGTATCGA CGCTGGGCGG GCTGGCCCTG
TTCGGCCTCA ACGGCTTCGT CATCGGCCCG GTGATCGCCG CTCTGTTCGT ATCGACCTGG
ACCCTCTTCC AGACGCACTG A
 
Protein sequence
MINPRFEYRV FLFLLVLISV AFVWIILPFY GAIFWAAVLA ILFHPLQIRL QRHLGNHPNL 
SALLTLIVCV VVAVLPITIV SMLLIQEGAT LYNEIEAGRI DFAGMLEGLK AQLPEPLQAQ
MSRFGLDSRY DLRDRIANIA MQGSQLLATK AFNIGQNTFQ FILGFFVMLY LLFFFLRDGT
ALVARIREAI PLSEMKKSRL FQRITGMVQA TIKGSLVVAV IQGSLGGVIF ALLGIPRALL
WGVAMAFLSF LPALGTGLVW APVAIYFLLS GAILKSVLLT ACGIFIIGLV DNIVRPILVS
KDTRLPDYLV LVSTLGGLAL FGLNGFVIGP VIAALFVSTW TLFQTH