Gene Avin_10390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10390 
Symbol 
ID7759984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp984249 
End bp985166 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID643803944 
Productmalonate utilisation transciptional regulator, LysR family 
Protein accessionYP_002798246 
Protein GI226943173 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG ACGAAGAACT GACGTTCAAG AAACTGGAAA TTTTCCTGGC CTTCATGCGC 
AGCGGCAACC TGTCGCGCGC CGCCGCCGAG CTGGACACCA GCACGGTCAG CGTGCACCGC
GCCCTGCATT CGCTGGAGAA CGCTCTGCGC TGCCCGCTGT TCAAGCGCGA AGGACGCAAG
CTGACGCCGC TGGAGAGCGC CCATGTGCTG GAGGACCGCG CGCAGAAGCT GGTCGCCGAC
GTGCTCGACA CCGTGCGCCT GACCCGCGAG GCCGCCGGCT TCTCCGCCGA GCGCTTCAAG
CTCGGCGCGC TCTACTCGCT GACGGTGAAG ACCGTGCCGC AATTGATCAT GGGCCTCAAG
CTGCGGCGCA GCACGCTGAA CATCGACCTG ATCCTCGGCT CCAACATCGA CCTGCTGTAC
AAGCTGAAGA ACCTCGAGCT GGACGCCATC CTGGTCTCGC TCAACGACAG CGTGAGCGAT
CCGGACTGCG AGTCGCTGCC GCTGTTTCGC GACGACATTT TCCTCGCCGT ACCGGTCGAC
TCGCCTTTCG CCGGCCAGGC CGAGGTCGAC CTGGCCGAAC TGCGCGAAGC CACCTTCATC
ACCCTGACCC AGGGCTTCGC CACCCACCAG GACGCCCTGC GCGTGTTCCG CCAGGCCGGC
TTCGCGCCCA AGGTGGCGAT GCAGGTCAAC GACATCTTCA CCCTGCTCAG CATGGTCAGC
TCCGGGGTCG GTTACGCCCT GCTGCCGGGG CGCATCGCCG CGGTGTACGA GAACCGCATA
CGGTTGATCC CGCTCGAGAC GCGCTACCGC CTGCAGCAGC AGATCGGCGT GGTGTTCCTC
AAGAGCCGCG AGCGCGACCC CAACCTGCTG GCCCTGCTCG CCGAGTGCCG GATGTACGCC
AAGCGCCACG CGGGCTGA
 
Protein sequence
MQIDEELTFK KLEIFLAFMR SGNLSRAAAE LDTSTVSVHR ALHSLENALR CPLFKREGRK 
LTPLESAHVL EDRAQKLVAD VLDTVRLTRE AAGFSAERFK LGALYSLTVK TVPQLIMGLK
LRRSTLNIDL ILGSNIDLLY KLKNLELDAI LVSLNDSVSD PDCESLPLFR DDIFLAVPVD
SPFAGQAEVD LAELREATFI TLTQGFATHQ DALRVFRQAG FAPKVAMQVN DIFTLLSMVS
SGVGYALLPG RIAAVYENRI RLIPLETRYR LQQQIGVVFL KSRERDPNLL ALLAECRMYA
KRHAG