Gene Avin_10340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10340 
Symbol 
ID7759979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp979977 
End bp980912 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content75% 
IMG OID643803939 
Productacyl-carrier-protein S-malonyltransferase 
Protein accessionYP_002798241 
Protein GI226943168 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR03131] malonate decarboxylase, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCC TGTTCGCCTT TCCCGGCCAG GGCGCCCAGC AGCCGGCCAT GCTTCACCAA 
CTGCCGGACG AGCCTCTGGT GCGGGCCTGC CTGGAGGAGG CCAGCGACGC GCTGGGCGAG
GACGTGCGGG CGCTGGACAG CGCCGAGGCT CTGGCCTCGA CCCGCGCCGT GCAGCTCTGC
CTGCTGCTCG CCGGGGTCGC CGGCGCGCGG CTGCTGCTGG CGCGCGGCGC ACGGCCGGAT
TATGTCGCCG GGTTGTCGGT CGGCGCCTAT CCGGCGGCGG TGGTCGGCGG TGCGCTGGAG
CTGGCCGATG CGGTGCGCCT GGTGGCCCTG CGCGGCGAAC TGATGGAACG GGCCTGGCCG
GGCGGTCATG GCATGACCGC CATCATGGGC CTCGGTCCGG CCGAGCTGGA GCCCTTGCTG
GCGCGGGTCA ACGGCCCGGA CAGCCCGGTG TTCCTGGCCA ACATCAACGC CGACAACCAG
TTGGTGATCG CCGGCAGCGA GGCGGCGATG AGCGCGGTCG GCGAACTGGC CCGGCGCAGC
GGCGCCGGTG CGGCGCGGCG GCTGGCGGTC AGCGTGCCCT CGCACTGCGC GCTGCTGGCC
GAACCGGCGG CGCGACTGGC CGAGGCCTTC GCCGGGGTGC GGCTGCGCCG CCCGGCGCTG
CGCTACCTGA GCGGCAGCTC GGCGCGCCTG CTGCTCGATC CCGAGGCGCT GCGCGACGAT
CTGGCTTTCA ACATGTGCCG TGTGGTCGAC TGGCGAGGCA CCCTGCGCAG CGCCTACGAG
CGCGGCGTGC GCCTGCACGT CGAGCTGCCG CCCGGCACGG TGCTCAGCGG CCTGGCGCGG
CGGGCGATGC GCCAGGGCGC TGTGATCGCC TTCCAGGGCG CCCGCCTCGA CACACTGGAT
GCGCTGCTGC GCGAGGAGGG TTGTCTCGAC CGCTGA
 
Protein sequence
MSSLFAFPGQ GAQQPAMLHQ LPDEPLVRAC LEEASDALGE DVRALDSAEA LASTRAVQLC 
LLLAGVAGAR LLLARGARPD YVAGLSVGAY PAAVVGGALE LADAVRLVAL RGELMERAWP
GGHGMTAIMG LGPAELEPLL ARVNGPDSPV FLANINADNQ LVIAGSEAAM SAVGELARRS
GAGAARRLAV SVPSHCALLA EPAARLAEAF AGVRLRRPAL RYLSGSSARL LLDPEALRDD
LAFNMCRVVD WRGTLRSAYE RGVRLHVELP PGTVLSGLAR RAMRQGAVIA FQGARLDTLD
ALLREEGCLD R