Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_09080 |
Symbol | miaB |
ID | 7759856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 855913 |
End bp | 857241 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643803820 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002798122 |
Protein GI | 226943049 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.370572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGA AGCTTTTCAT CGAAACCCAC GGCTGCCAGA TGAACGAGTA CGACAGCTCG CGCATGGCCG ACCTGCTGGG TGAGCACCAG GCTCTGGAAC TCACCGAGAA CCCGGCGGAA GCCGACGTCA TCCTCCTCAA TACCTGCTCG ATCCGCGAGA AGGCCCAGGA AAAGGTGTTT TCCCAGTTGG GTCGCTGGCG CGAGTTGAAG AAGCGCAACC CGGCGCTGGT GATCGGCGTC GGCGGTTGCG TGGCCAGCCA GGAGGGCGCG GCGATCCGCG AACGCGCGCC CTACGTCGAC GTGGTGTTCG GTCCGCAGAC CCTGCACCGC CTGCCGGAGA TGATCGACGC CGCGCGCAGC ACCCGGCAGC CGCAGGTGGA CGTTTCCTTC CCGGAGATCG AGAAGTTCGA CCGCCTGCCC GAGCCGCGGG TCGACGGCCC CAGCGCCTTC GTCTCGGTGA TGGAGGGCTG CAGCAAGTAC TGCAGCTACT GCGTGGTGCC CTACACCCGC GGCGAGGAGG TCAGCCGGCC GCCGGAAGAC GTGCTCGCCG AGGTCATCCA CTTGGCCGAG AACGGCGTGC GCGAGGTCAC CCTGCTCGGC CAGAACGTCA ACGGCTACCG GGCCACGACC GCCGACGGAC GCCCGGTCGA CTTCGCCGAG CTGCTCCATC TGGTCGCCGC CGTCGACGGC ATCGACCGCC TGCGCTACAC CACCAGCCAC CCGCTGGAAT TCTCCGACGC CATCATCGCG GCGCATGCCG AGATCCCGGA ACTGGTGAAG TTCGTCCACC TGCCGGTGCA GTCCGGCTCC GACCGGATCC TCGCGGCGAT GAAGCGCAAC CACACCGCGC TGGAGTACAA GTCGCGGATC CGCAAGCTGA AGGCGGCGGT GCCGGACATC AGCATCAGTT CGGACTTCAT CGTCGGCTTC CCCGGCGAGA CCGAGCAGGA CTTCGCGCAG ACCATGAAAC TGATCGAGGA GGTCGGCTTC GACTTCTCCT TCTCCTTCGT GTTCAGCCCG CGCCCCGGCA CCCCGGCGGC GGAACTGCCC GACGACACCC CGGAAGAGCT GAAGAAGCAG CGCCTGCAAA TCCTACAGAA CCGCATCTAC CAGCAGGGCT TCGAGATCAG CCGGCGGATG GTCGGCAGCA TCCAGCGCAT CCTGGTCAGC GACTACTCGA AGAAAGACCC CGGCATGCTC CAGGGGCGCA CCGAGAACAA CCGCATCGTC AACTTCACCT CGAACGACCC GCGGCTGATC GGCCAGTTCG TCCGGGTGCG CATCGACGAC GCCCTGCCCC ACTCCCTGCG CGGCAGCCTG CTCGACTGA
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Protein sequence | MAKKLFIETH GCQMNEYDSS RMADLLGEHQ ALELTENPAE ADVILLNTCS IREKAQEKVF SQLGRWRELK KRNPALVIGV GGCVASQEGA AIRERAPYVD VVFGPQTLHR LPEMIDAARS TRQPQVDVSF PEIEKFDRLP EPRVDGPSAF VSVMEGCSKY CSYCVVPYTR GEEVSRPPED VLAEVIHLAE NGVREVTLLG QNVNGYRATT ADGRPVDFAE LLHLVAAVDG IDRLRYTTSH PLEFSDAIIA AHAEIPELVK FVHLPVQSGS DRILAAMKRN HTALEYKSRI RKLKAAVPDI SISSDFIVGF PGETEQDFAQ TMKLIEEVGF DFSFSFVFSP RPGTPAAELP DDTPEELKKQ RLQILQNRIY QQGFEISRRM VGSIQRILVS DYSKKDPGML QGRTENNRIV NFTSNDPRLI GQFVRVRIDD ALPHSLRGSL LD
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