Gene Avin_08100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_08100 
Symbol 
ID7759764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp765280 
End bp766866 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content69% 
IMG OID643803728 
ProductABC transporter, permease component 
Protein accessionYP_002798030 
Protein GI226942957 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAA CAATCACTGC TTCGTACAGT CCCACGCGGT CCAGCCTGCT CTTCCGCCAG 
GGCGGCGACA GCCTGCTGCC CTGGCTGGTG CCGGCCGGAA TCTTCCTGGC CTGGAGCCTG
GCGAGCCATT TCGGCTGGAT GAGCCGGCAA GTGCTGCCGC CGCCTTCGCT GGTCTGGCAG
ACCCTGCTGG AACTCGGCGG CGGCGAGCTT TGGGAACATC TGGGCATCAG CCTGCGGCGC
CTGGCCCTCG GTCTGCTGGC AGGGGTCGCC GCCGGCGCCT TACTGGGCGC CACGCTCGGC
GCCAACGCCC GCCTGGAGCG GCTGGCCTAC CCCACCTTCG CCAGCCTGGC GCAGGTGCCG
ACCCTGGCCT GGATTCCCCT GTTCATGCTG TTCTTCGGCA TCGGCGAAGC CCTCAAGCTG
GTGGTGCTGA TCAAGGCCGT GGTGGTACCG GTGACGGTGC ATACCCTGGT CGGCGTGCGC
GATACCCAAC CGCGCCTGCG CGAAGCCGCG GCGGTGCTGC GCCTGGCGCC GCACCTGCGC
CTGTGGCGAT TGACCGTGCC CGCCGCCCTG CCTTCCTTCA TGGCCGGCCT GCGCATCGCC
CTGAGTACCG CCTGGTCCTC GCTGCTGGCG GTGGAGCTGC TGGCCTCCAG CGAAGGCATC
GGCTACCTGA TGGTCTGGGG CCGGCAGTTG TTCATGCTGG ACATCGTCTT CGTCTGCATC
CTGGCGATCG GCCTGCTCGG CGTGCTGATG GACAAGGGCA TCGCCCTGCT CGACCGGCGC
CTGCTGTTCT GGCCGCACCC ACCGCTCGCG GAGTTCCGCC GGCGGCATAT AAAGAGCGAC
TGGCAGCGCC TGGAACCCTG GCTGCTGCCA TTGGCGCTGC TGGGCCTCTG GCAACTGGCC
TGCAGCCGGC AATGGATCGA CGCCAATATT CTGGTGGCGC CAATCGCGGT ACTGCACAGC
ATCTGGTCCG GGTTACTCGA CGGCAGCCTG GGCGAAGCCC TGGCGCGCAG CCTCGGCCGC
GCCCTGGGCG GACTGCTGCT GGGTGGCGGC CTGGGTCTGG CCATGGGCAT CCTGCTCGGC
CTGTGGAGGC CCGGCGAACG CCTGCTCGGC CCGACCCTCG GCGTGCTGCG CCATGTGGCG
ATCTTCGCCT GGGTGCCGCT GATCACCGCC TGGTTCGGGC TGGGCGAAGC GGCCAAGCTG
GTGTTCGTCG CTTTCGCCAC CTTTTTCCCG CTGTTCATCG CCACCCGGCG GGGCATCGCC
AACCTTTCAC CGCAACTGGA CGAAGCGGCG CGGGTGCTGC GCCTGAACCA CCGCCTTCGC
CTGACCCGCC TGGTGCTGCC GGGTGCCGCC CCGGCGATCT TCGCCGGCCT GCGCCTGGCG
CTGATCTACG CCTGGCTGGG CACCATCGGC GCCGAGTATT TCATGCCCTC GGATGGCGGC
ATCGGCAGCC TGATGATCGC GGCCCAGCAA CTGTTCCAGA TGGACCGGAT CATGGCCGCC
ATGTCGCTGA TCGGCCTCAC CGGTGCCCTG ATCAATACCC TCGGACAACT GATCGAAGCG
CGCGCCACGC GCTGGAGAAA CGCATGA
 
Protein sequence
MSRTITASYS PTRSSLLFRQ GGDSLLPWLV PAGIFLAWSL ASHFGWMSRQ VLPPPSLVWQ 
TLLELGGGEL WEHLGISLRR LALGLLAGVA AGALLGATLG ANARLERLAY PTFASLAQVP
TLAWIPLFML FFGIGEALKL VVLIKAVVVP VTVHTLVGVR DTQPRLREAA AVLRLAPHLR
LWRLTVPAAL PSFMAGLRIA LSTAWSSLLA VELLASSEGI GYLMVWGRQL FMLDIVFVCI
LAIGLLGVLM DKGIALLDRR LLFWPHPPLA EFRRRHIKSD WQRLEPWLLP LALLGLWQLA
CSRQWIDANI LVAPIAVLHS IWSGLLDGSL GEALARSLGR ALGGLLLGGG LGLAMGILLG
LWRPGERLLG PTLGVLRHVA IFAWVPLITA WFGLGEAAKL VFVAFATFFP LFIATRRGIA
NLSPQLDEAA RVLRLNHRLR LTRLVLPGAA PAIFAGLRLA LIYAWLGTIG AEYFMPSDGG
IGSLMIAAQQ LFQMDRIMAA MSLIGLTGAL INTLGQLIEA RATRWRNA