Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_08100 |
Symbol | |
ID | 7759764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 765280 |
End bp | 766866 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643803728 |
Product | ABC transporter, permease component |
Protein accession | YP_002798030 |
Protein GI | 226942957 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGAA CAATCACTGC TTCGTACAGT CCCACGCGGT CCAGCCTGCT CTTCCGCCAG GGCGGCGACA GCCTGCTGCC CTGGCTGGTG CCGGCCGGAA TCTTCCTGGC CTGGAGCCTG GCGAGCCATT TCGGCTGGAT GAGCCGGCAA GTGCTGCCGC CGCCTTCGCT GGTCTGGCAG ACCCTGCTGG AACTCGGCGG CGGCGAGCTT TGGGAACATC TGGGCATCAG CCTGCGGCGC CTGGCCCTCG GTCTGCTGGC AGGGGTCGCC GCCGGCGCCT TACTGGGCGC CACGCTCGGC GCCAACGCCC GCCTGGAGCG GCTGGCCTAC CCCACCTTCG CCAGCCTGGC GCAGGTGCCG ACCCTGGCCT GGATTCCCCT GTTCATGCTG TTCTTCGGCA TCGGCGAAGC CCTCAAGCTG GTGGTGCTGA TCAAGGCCGT GGTGGTACCG GTGACGGTGC ATACCCTGGT CGGCGTGCGC GATACCCAAC CGCGCCTGCG CGAAGCCGCG GCGGTGCTGC GCCTGGCGCC GCACCTGCGC CTGTGGCGAT TGACCGTGCC CGCCGCCCTG CCTTCCTTCA TGGCCGGCCT GCGCATCGCC CTGAGTACCG CCTGGTCCTC GCTGCTGGCG GTGGAGCTGC TGGCCTCCAG CGAAGGCATC GGCTACCTGA TGGTCTGGGG CCGGCAGTTG TTCATGCTGG ACATCGTCTT CGTCTGCATC CTGGCGATCG GCCTGCTCGG CGTGCTGATG GACAAGGGCA TCGCCCTGCT CGACCGGCGC CTGCTGTTCT GGCCGCACCC ACCGCTCGCG GAGTTCCGCC GGCGGCATAT AAAGAGCGAC TGGCAGCGCC TGGAACCCTG GCTGCTGCCA TTGGCGCTGC TGGGCCTCTG GCAACTGGCC TGCAGCCGGC AATGGATCGA CGCCAATATT CTGGTGGCGC CAATCGCGGT ACTGCACAGC ATCTGGTCCG GGTTACTCGA CGGCAGCCTG GGCGAAGCCC TGGCGCGCAG CCTCGGCCGC GCCCTGGGCG GACTGCTGCT GGGTGGCGGC CTGGGTCTGG CCATGGGCAT CCTGCTCGGC CTGTGGAGGC CCGGCGAACG CCTGCTCGGC CCGACCCTCG GCGTGCTGCG CCATGTGGCG ATCTTCGCCT GGGTGCCGCT GATCACCGCC TGGTTCGGGC TGGGCGAAGC GGCCAAGCTG GTGTTCGTCG CTTTCGCCAC CTTTTTCCCG CTGTTCATCG CCACCCGGCG GGGCATCGCC AACCTTTCAC CGCAACTGGA CGAAGCGGCG CGGGTGCTGC GCCTGAACCA CCGCCTTCGC CTGACCCGCC TGGTGCTGCC GGGTGCCGCC CCGGCGATCT TCGCCGGCCT GCGCCTGGCG CTGATCTACG CCTGGCTGGG CACCATCGGC GCCGAGTATT TCATGCCCTC GGATGGCGGC ATCGGCAGCC TGATGATCGC GGCCCAGCAA CTGTTCCAGA TGGACCGGAT CATGGCCGCC ATGTCGCTGA TCGGCCTCAC CGGTGCCCTG ATCAATACCC TCGGACAACT GATCGAAGCG CGCGCCACGC GCTGGAGAAA CGCATGA
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Protein sequence | MSRTITASYS PTRSSLLFRQ GGDSLLPWLV PAGIFLAWSL ASHFGWMSRQ VLPPPSLVWQ TLLELGGGEL WEHLGISLRR LALGLLAGVA AGALLGATLG ANARLERLAY PTFASLAQVP TLAWIPLFML FFGIGEALKL VVLIKAVVVP VTVHTLVGVR DTQPRLREAA AVLRLAPHLR LWRLTVPAAL PSFMAGLRIA LSTAWSSLLA VELLASSEGI GYLMVWGRQL FMLDIVFVCI LAIGLLGVLM DKGIALLDRR LLFWPHPPLA EFRRRHIKSD WQRLEPWLLP LALLGLWQLA CSRQWIDANI LVAPIAVLHS IWSGLLDGSL GEALARSLGR ALGGLLLGGG LGLAMGILLG LWRPGERLLG PTLGVLRHVA IFAWVPLITA WFGLGEAAKL VFVAFATFFP LFIATRRGIA NLSPQLDEAA RVLRLNHRLR LTRLVLPGAA PAIFAGLRLA LIYAWLGTIG AEYFMPSDGG IGSLMIAAQQ LFQMDRIMAA MSLIGLTGAL INTLGQLIEA RATRWRNA
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