| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_07400 |
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| Symbol | |
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| ID | 7759692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 697370 |
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| End bp | 699013 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643803657 |
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| Product | HAMP domain protein |
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| Protein accession | YP_002797961 |
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| Protein GI | 226942888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.256184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGGC CAGCCTCCGC CAAGCCCGAA AACTTCTTCG TCCTGCTGTT CCGCGCCTTG
TGCCAGCGGC GCGTCCCAGT CTCCCTGCGT ATCGTCAGCC ACAGCCTGGT GCTGGTGATC
CTGGCCCTGG CCCTCTATTC CTGGCTGGTC GGCCTGCAGG TCCGCCAGAC CATGCACGAG
CAGGCCGATG CCCTCGGCCA GACGCTGACC ACCCAGACCA GCGCCGCGGC CAGCCACCTG
TTGGTGGCCA ACGACATCCT CAGCCTCAAC GTGCTGCTGG GCAACTTGAC GAAGAACCCG
CTGGTCGCCC ACGCGGCCGT CTACAACGCG GACAACCACC TGCTCGCCGA AGCCGGCAAC
CGTCCGCCGC GGATGCCGCC GGAAGGCGAT CCCAGCCTCC ACGCCCGGCC CATCACCTTC
CAGGACAGTG TGACCGGTCA CCTGCGCATC GTCCTGAACA TGCCGCAGTT CCGCGAGCCC
TTCATCATCG GCCTGCGCAA CATGGGCCTG CTCGGCCTGG GCCTGCTGCT GCTGACGCTG
ATTCTCGGCC TGCGCCTGGG CTACGGCATC TCCACGCCGC TGCTGCAGTT GCGCGTCTGG
CTGCGCGAGC CGGACGACCA GCCCCCCGGC GCCGAACGCC AGGACGAGAT CGGCGACCTG
GCCCGCCAGT TGCGAACCCG TCTCGCCCCC GAGCGGGCGT CCCGCCCAGC GCCCGACGGA
CTCGAGGACG ACGAGCTGTC GCTCGACCTG TCCGATGCGC CTTCCACGGC CAGGACGTCC
GCCGGGAAGC CGGTCTCACG CCCCATGTCC CACACGGCGG TGCCACCCTT CGCCACGCCC
GAGCCGGCGA AGCGCAACGT GGCGGTGCCC GACGCCTCGA GACTCGGCGC GACGAACGCC
AGGGCGGAGT CCTCGTCGCA TCCCCTGTCC GGCTTGCACG CCGATATCGA CGACCTGGAC
GACGAGGCCC CGCCGCTGCG CCGGCTGGTC CCGGATGCCG GCGACGAGCC CGGCTTCGGC
GTGGACTTCG ACGAAGACGT CGCCCCCGCG TCCGCCTCGC ACCGTCAGGC CCGCGAGAGC
GCTGTGCTGG CCATCCAGCT CGGCCCCCTG GACCAGTTGC GCAACCTGTC CCGCGAACGG
CTGGCGGAAC TGCGCCGGCG CTATCGCGAC AGCCTGGAGC AGGCTGCGGC GTTCTACGGT
GGCGAACTGC ACCCGCTCGA CGAGGACGGC GGCCTGCTGC TGTTCCATCG CCGCGAGTGC
GGCGACGACT ACCTGGCCGG TGCCATCTGT TGCGCCGAAC TGCTGCGTTC GCTGAAATCC
GAGTTGGAGC TCGAGGCCGC CGGCGACGCC AGCCTGCAAT TGCAGCTCGG CCTCGCGCGC
GGCGACAAGC TCGCCGGCCT CGGCCAGGCG GCCCTGCTGC TCAGCCCGGG CGGCCAGTCC
GCACTGACCC TGGCGCAGTA CAGCCACGAC GTCCTGCTGC TGGAGCGGCA GATCGGCGAG
GACCCCGCAG CCCGCCAGTG CGCGCGCTTG CGGTCGCTAG CCAATCCGGA AGGCGCCGCC
ACCATCGAGT ACCTGCTCGA ACCCTACGCC ACCGAACTGG ACGGCCAGTT GGCCCGCCTG
CGCGAGGAGC TGCAAAGCTA TTGA
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| Protein sequence | MTRPASAKPE NFFVLLFRAL CQRRVPVSLR IVSHSLVLVI LALALYSWLV GLQVRQTMHE
QADALGQTLT TQTSAAASHL LVANDILSLN VLLGNLTKNP LVAHAAVYNA DNHLLAEAGN
RPPRMPPEGD PSLHARPITF QDSVTGHLRI VLNMPQFREP FIIGLRNMGL LGLGLLLLTL
ILGLRLGYGI STPLLQLRVW LREPDDQPPG AERQDEIGDL ARQLRTRLAP ERASRPAPDG
LEDDELSLDL SDAPSTARTS AGKPVSRPMS HTAVPPFATP EPAKRNVAVP DASRLGATNA
RAESSSHPLS GLHADIDDLD DEAPPLRRLV PDAGDEPGFG VDFDEDVAPA SASHRQARES
AVLAIQLGPL DQLRNLSRER LAELRRRYRD SLEQAAAFYG GELHPLDEDG GLLLFHRREC
GDDYLAGAIC CAELLRSLKS ELELEAAGDA SLQLQLGLAR GDKLAGLGQA ALLLSPGGQS
ALTLAQYSHD VLLLERQIGE DPAARQCARL RSLANPEGAA TIEYLLEPYA TELDGQLARL
REELQSY
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