Gene Avin_06730 details

Gene Information

• Locus tag: Avin_06730
• Symbol: ribE
• ID: 7759627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 639956
• End bp: 640615
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643803595
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_002797899
• Protein GI: 226942826
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACCG GCATAATCGA GGCCATCGGC ACCATCCGCG CACTCACCCC CAAGGGCGGC 
GACGCGCGCG TCTACGTCCA CACCGGCAAG CTGGACCTGT CCGACGTCAA GCTCGGCGAC 
AGCATCGCCG TGAACGGCAT CTGCCTGACC GCGGTGGAAC TGCCCGGCGA TGGCTTCTGG 
GCCGACGTCA GCCGCGAGAC CCTGGCGCGC ACCGCCTTCA TCGACCTCAA GGCCGGCAGC 
CGGGTCAACC TGGAGAAGGC CCTGACCCCG ACCAGCCGTC TCGGCGGTCA CCTGGTCAGT 
GGCCACGTCG ACGGTGTCGG CGAGGTGTTG TCCCGCGAGG ACAACGCCCG CGCCGTGCAG 
TTTCGCATCC ACGCACCGCG CGAGCTGGCC CGTTACATCG CCCTCAAGGG ATCGATCACC 
GTCGATGGCA CCAGCCTGAC GGTCAACGGG GTGAACGGCG CCGAGTTCGA ACTGACCATC 
GTGCCCCATA CCCTGGGCGA GACCATCATG GCCGACTACC GGCCGGGCCG GCAGGTGAAC 
CTGGAGGTGG ACCTCCTGGC ACGCTACCTG GAGCGCCTGA TGCTCGGCGA CAAGGCCGCC 
GAGCCCGACG CTTCCGGTCT CACCGCAAGC TTTCTGGCCG AGCACGGCTA CCTGAAGTAA 

 

Protein sequence

MFTGIIEAIG TIRALTPKGG DARVYVHTGK LDLSDVKLGD SIAVNGICLT AVELPGDGFW 
ADVSRETLAR TAFIDLKAGS RVNLEKALTP TSRLGGHLVS GHVDGVGEVL SREDNARAVQ 
FRIHAPRELA RYIALKGSIT VDGTSLTVNG VNGAEFELTI VPHTLGETIM ADYRPGRQVN 
LEVDLLARYL ERLMLGDKAA EPDASGLTAS FLAEHGYLK