Gene Avin_06570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06570 
Symbol 
ID7759611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp627943 
End bp628821 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID643803579 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002797883 
Protein GI226942810 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA TGCTACTGGG CGGTGGTAGC GCCCTGGGCC GGGCCTTGGT GCACCTGGGC 
GCCGAGGCCG ATGTCAGCTT CCTGGCGCCG CGTCCTCCGG AGCGGGGATG GGACTCGGCC
AGCCTGACCC GGTTGCTCGA CGAGACCCGT CCCGATGCGC TGGTCAATCT CGCCTACTAC
CACGACTGGT TCCAGGCCGA CACCCTGGAT GCTGAGCGCC TGGCCAATCA GGAGCGTGCG
GCCGAGCGCC TCGCCGAGCT TTGCCAGCAC CATCGGATCA TCCTGTTGCA ACCCTCCAGC
TACCGGGTTT TCGACGGTAC CCGGGCCACG GCCTACAGCG AGAAGGACGA GCCGGCGCCG
CTCGGCTTGC GCGGGCAGGC TTTGTTGCGC GTCGAGCAGA GCGTGAGGGC GCTCTGTCCC
CGGCATGTGC TGCTGCGCTT CGGCTGGCTG TATGACGACA CCCTCGACGG GGTGCTCGGG
CGTTTTCTCC TGCGTGCCGA ACGGGAAAGC GTATTGGCGC TGGCCGACGA TCGTCGCGGC
AATCCGACGC TGGTGGACGA TGCCGCCCGG GTGATGCTCG CCGTACTCAA GCAACTGGAT
TGCCAGGCAC CGTTGTGGGG TACTTACCAT TATGGTGGTC ACGAAGCGAC CACCGCGTTG
GCGTTCGGCC AGGCGGTCCT TGGCGAGGCG CGCGTCTACC GCAGGCTGGC CGTCGAGGAT
ATCCAGGCCC TGCCGCACGG GGCGACTCCG GATGCGGCCG AAGAGCCGCA ACATGCAGTG
CTATCCTGCA GGAAGATTCT CAATACCTTC GGTATCAAGC CGCGTGCCTG GCGCGCCGGT
TTGCCGAATC TGCTGGATCG TTATTATCGC TATGTCTGA
 
Protein sequence
MRLMLLGGGS ALGRALVHLG AEADVSFLAP RPPERGWDSA SLTRLLDETR PDALVNLAYY 
HDWFQADTLD AERLANQERA AERLAELCQH HRIILLQPSS YRVFDGTRAT AYSEKDEPAP
LGLRGQALLR VEQSVRALCP RHVLLRFGWL YDDTLDGVLG RFLLRAERES VLALADDRRG
NPTLVDDAAR VMLAVLKQLD CQAPLWGTYH YGGHEATTAL AFGQAVLGEA RVYRRLAVED
IQALPHGATP DAAEEPQHAV LSCRKILNTF GIKPRAWRAG LPNLLDRYYR YV