Gene Avin_06090 details

Gene Information

• Locus tag: Avin_06090
• Symbol: tuf
• ID: 7764108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 588990
• End bp: 590183
• Gene Length: 1194 bp
• Protein Length: 397 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643803531
• Product: elongation factor Tu
• Protein accession: YP_002797836
• Protein GI: 226942763
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.878067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGG AAAAGTTCGA GCGTAACAAG CCGCACGTCA ACGTTGGCAC CATCGGTCAC 
GTGGACCATG GCAAGACCAC TCTGACGGCC GCTCTGACCA AGGTTTGTGC CGAGACCTGG 
GGTGGCGCCG CTCGTGCCTT CGATCAGATC GACAACGCTC CGGAAGAAAA GGCGCGCGGT 
ATCACCATCA ACACCTCGCA CGTTGAATAC GACTCCGCGA CCCGTCACTA CGCGCACGTC 
GACTGTCCCG GTCATGCCGA CTACGTGAAG AACATGATCA CCGGCGCCGC CCAGATGGAC 
GGCGCGATCC TGGTCTGCTC GGCCGCCGAC GGCCCCATGC CGCAGACCCG CGAGCACATC 
CTGCTGTCCC GCCAGGTAGG CGTTCCCTAC ATCGTCGTGT TCCTGAACAA GGCCGACATG 
GTCGACGACG CCGAACTGCT GGAACTGGTC GAGATGGAAG TGCGTGATCT GCTGTCCACC 
TACGACTTCC CGGGCGACGA CACCCCGATC ATCACCGGCT CTGCCCTGAT GGCGCTGGAA 
GGCAAGGACG ACAACGGCAT CGGCGTCTCC GCCGTGCGTA AGCTGGTGGA AACCCTGGAC 
TCCTATATTC CGGAGCCGGT GCGTGCCGTC GATCAGCCGT TCCTGATGCC GATCGAGGAC 
GTGTTCTCGA TCTCCGGCCG CGGCACCGTG GTGACCGGTC GCGTCGAGCG CGGCATCGTC 
AAGGTCGGCG AGGAAGTGGA AATCGTCGGT ATCCGTCCGA CCACCAAGAC CACCTGCACC 
GGCGTGGAAA TGTTCCGTAA GCTGCTCGAC GAAGGGCGTG CCGGCGAGAA CATCGGCGCC 
CTGCTGCGCG GCACCAAGCG TGAGGACGTG GAGCGCGGCC AGGTTCTGGC CAAGCCGGGC 
ACCATCAAGC CGCACACCAA GTTCGAAGCC GAAGTGTATG TGCTGTCCAA GGAAGAAGGT 
GGTCGTCACA CCCCGTTCTT CAAGGGCTAC CGCCCGCAGT TCTACTTCCG TACCACCGAC 
GTGACCGGTA ACGTCGAGCT GCCGGAAGGC GTCGAGATGG TGATGCCGGG TGACAACATC 
AAGATGACCG TCACCCTGAT CGCTCCGATC GCCATGGAAG ACGGTCTGCG TTTCGCCATC 
CGCGAAGGCG GTCGTACCGT CGGCGCCGGT GTGGTGGCCA AGATCATCGA GTAA 

 

Protein sequence

MAKEKFERNK PHVNVGTIGH VDHGKTTLTA ALTKVCAETW GGAARAFDQI DNAPEEKARG 
ITINTSHVEY DSATRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 
LLSRQVGVPY IVVFLNKADM VDDAELLELV EMEVRDLLST YDFPGDDTPI ITGSALMALE 
GKDDNGIGVS AVRKLVETLD SYIPEPVRAV DQPFLMPIED VFSISGRGTV VTGRVERGIV 
KVGEEVEIVG IRPTTKTTCT GVEMFRKLLD EGRAGENIGA LLRGTKREDV ERGQVLAKPG 
TIKPHTKFEA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNVELPEG VEMVMPGDNI 
KMTVTLIAPI AMEDGLRFAI REGGRTVGAG VVAKIIE