Gene Avin_05980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05980 
SymbolbioB 
ID7759554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp579667 
End bp580722 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID643803518 
ProductBiotin synthase 
Protein accessionYP_002797826 
Protein GI226942753 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCT CCGCCGCCTC CCTGCGTCAC GACTGGACCC TCGACGAGGT CCGGGCGCTG 
TTCGAACTGC CGTTCAACGA TCTGCTGTTC CAGGCGCATG CGGTACATCG CCAGCATTTC
GACCCCAACC GCGTGCAGGT GTCGACCCTG TTGTCGATCA AGACCGGCGC CTGCCCGGAG
GACTGCAAGT ACTGCTCGCA GTCCGGCCAT CACAACACCG GGCTGGACAA GGCCAAGCTG
ATGGAGGTGC AGAAGGTCAT CCGGGCCGCC GCCGAGGCCA AGGCCATCGG TTCCACCCGC
TTCTGCATGG GCGCCGCCTG GAAGCACCCC TCGGCCAAGG ACATGCCCTA CGTGCTGGAG
ATGGTCAAGG GCGTGAAGGC CCTGGGCCTC GAAACCTGCA TGACCCTGGG CACCCTGAGC
CGCGAGCAGA CCCGGGCGCT GGCCGAGGCC GGCCTCGACT ATTACAACCA CAACCTGGAC
ACCTCGCCGG AGTTCTACGG CAACATCGTC ACCACCCGCA CCTACGCCGA GCGCCTGGAA
ACCCTGGCCC ACGTGCGCGA GGCGGGGATG AAGATCTGCT CCGGCGGCAT CCTCGGCATG
GGCGAGTCCC TCGACGACCG CGCCGGCCTG CTGATCCAGT TGGCCAACCT GCCGGAGCAC
CCGGAGTCGG TGCCGATCAA CATGCTGGTC AAGGTCAAGG GCACTCCCCT GGAGAACGCC
GAGGACGTCG ATCCCTTCGA CTTCATCCGC ACCCTCGCCG TGGCGCGGAT CATGATGCCC
CGATCCCATG TGCGCCTGTC CGCCGGCCGT TCCGAGATGA ACGAGCAGAT GCAGGCCCTG
GCCTTCTTCG CCGGCGCCAA CTCGATCTTC TACGGCGAGC GCCTGCTGAC CACCGGCAAC
CCGGAGGCGG AGAAGGACAT GCGCCTGTTC GCCCGCCTCG GCATCCGGCC GGAGGAGCGC
GAGGAACATG CCGACGAGGT GCACCAAGCG GCCATCGAGC AGGCGTTGAT CGAGCAGAAG
AACAGCGCGC TGTTCTACGA CGCCACCTCG GCCTGA
 
Protein sequence
MSASAASLRH DWTLDEVRAL FELPFNDLLF QAHAVHRQHF DPNRVQVSTL LSIKTGACPE 
DCKYCSQSGH HNTGLDKAKL MEVQKVIRAA AEAKAIGSTR FCMGAAWKHP SAKDMPYVLE
MVKGVKALGL ETCMTLGTLS REQTRALAEA GLDYYNHNLD TSPEFYGNIV TTRTYAERLE
TLAHVREAGM KICSGGILGM GESLDDRAGL LIQLANLPEH PESVPINMLV KVKGTPLENA
EDVDPFDFIR TLAVARIMMP RSHVRLSAGR SEMNEQMQAL AFFAGANSIF YGERLLTTGN
PEAEKDMRLF ARLGIRPEER EEHADEVHQA AIEQALIEQK NSALFYDATS A