Gene Avin_05380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05380 
Symbol 
ID7759494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp518906 
End bp519910 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID643803458 
ProductPolysaccharide export protein 
Protein accessionYP_002797766 
Protein GI226942693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.273333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC CCCTGCTTTT CCTGCTCGCC CTCCTGGCCC TGGCCGGATG CAGCAGCCAG 
CGCTCGATTC CCGCCTACAT CCTCACCGCC CCCGAGGACC AGGCCACGCA CAGCGAACTG
ATCCCGGTGA CCCAGGTACT GCGCCCGCAG GACGTGCTCG ACGTGATCTT CCACATCGAG
ATGGATTCGC CCAACGCCTA CCGCATCCAG CCGGGCGACC AACTGGAGAT CCTGTTCGCC
ACCGCCAAGG GCCTGACCGG CATCAAGACG GTGATGCCCG ACGGCACCGT CAATCTGGAA
TACGTCGGCA GCCTCCAGGT CGCCGGGCTC ACCGTCGACG AGGCCCAGGC GCTGATGACC
GAGCGCTACA AGGACACCCT GCGCACACCG CTGATCACCG TCTCGGTGGC CAAGGCGCAG
ACCCGCGCCC AGAACCTGCG CGACACCCTG TTCAGCCCGA ACACCGGCAT GAGCCGGGAA
ATCACCGTCG GCGCCGACGG CCGCGCGACC TTCCCGATGC TCGGCAGCAT CCGCCTCGGC
GGCATGAACA GCGACGAACT CGAAAAACTC CTGAACGAGC GCTACCGCGA GGAAGTCGGG
CCGATCCAGG TCGACGTGCT GCTCAAGTCC ACCGCCGCCA ACGAGGTCTA CATACTCGGC
GAGGTCGGCC AGCCCGGCGC CTATCCGGTG CGCCGGCCGA TCTCGGTGCT CGAGGCGCTG
ACCCTGGCGC GCGGCTACAA CCCCGTCACC GCCGACCTGG AATCGGTGCT GATCCTGCAT
CGCGACGGCG AGCGGGTGGT GTCGCGCACC TACGACATGG AGGCGTTGCT CGACAACGAC
GCCGACAGCG TCGCCTACCT GCAGCCGGAC GACCTGCTCT TCGTGCCGCG CAGCAGCCTC
GCCGGCGCCG GCGACACCAT GCGCCAACTG GCCGACGTGA TGCTCTTCAG CGGCTTCAAC
TTCGGCTTCT CCTACCAGGT CGACGACAAG GACGAGGATG ACTGA
 
Protein sequence
MNKPLLFLLA LLALAGCSSQ RSIPAYILTA PEDQATHSEL IPVTQVLRPQ DVLDVIFHIE 
MDSPNAYRIQ PGDQLEILFA TAKGLTGIKT VMPDGTVNLE YVGSLQVAGL TVDEAQALMT
ERYKDTLRTP LITVSVAKAQ TRAQNLRDTL FSPNTGMSRE ITVGADGRAT FPMLGSIRLG
GMNSDELEKL LNERYREEVG PIQVDVLLKS TAANEVYILG EVGQPGAYPV RRPISVLEAL
TLARGYNPVT ADLESVLILH RDGERVVSRT YDMEALLDND ADSVAYLQPD DLLFVPRSSL
AGAGDTMRQL ADVMLFSGFN FGFSYQVDDK DEDD