Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_05380 |
Symbol | |
ID | 7759494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 518906 |
End bp | 519910 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643803458 |
Product | Polysaccharide export protein |
Protein accession | YP_002797766 |
Protein GI | 226942693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.273333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGC CCCTGCTTTT CCTGCTCGCC CTCCTGGCCC TGGCCGGATG CAGCAGCCAG CGCTCGATTC CCGCCTACAT CCTCACCGCC CCCGAGGACC AGGCCACGCA CAGCGAACTG ATCCCGGTGA CCCAGGTACT GCGCCCGCAG GACGTGCTCG ACGTGATCTT CCACATCGAG ATGGATTCGC CCAACGCCTA CCGCATCCAG CCGGGCGACC AACTGGAGAT CCTGTTCGCC ACCGCCAAGG GCCTGACCGG CATCAAGACG GTGATGCCCG ACGGCACCGT CAATCTGGAA TACGTCGGCA GCCTCCAGGT CGCCGGGCTC ACCGTCGACG AGGCCCAGGC GCTGATGACC GAGCGCTACA AGGACACCCT GCGCACACCG CTGATCACCG TCTCGGTGGC CAAGGCGCAG ACCCGCGCCC AGAACCTGCG CGACACCCTG TTCAGCCCGA ACACCGGCAT GAGCCGGGAA ATCACCGTCG GCGCCGACGG CCGCGCGACC TTCCCGATGC TCGGCAGCAT CCGCCTCGGC GGCATGAACA GCGACGAACT CGAAAAACTC CTGAACGAGC GCTACCGCGA GGAAGTCGGG CCGATCCAGG TCGACGTGCT GCTCAAGTCC ACCGCCGCCA ACGAGGTCTA CATACTCGGC GAGGTCGGCC AGCCCGGCGC CTATCCGGTG CGCCGGCCGA TCTCGGTGCT CGAGGCGCTG ACCCTGGCGC GCGGCTACAA CCCCGTCACC GCCGACCTGG AATCGGTGCT GATCCTGCAT CGCGACGGCG AGCGGGTGGT GTCGCGCACC TACGACATGG AGGCGTTGCT CGACAACGAC GCCGACAGCG TCGCCTACCT GCAGCCGGAC GACCTGCTCT TCGTGCCGCG CAGCAGCCTC GCCGGCGCCG GCGACACCAT GCGCCAACTG GCCGACGTGA TGCTCTTCAG CGGCTTCAAC TTCGGCTTCT CCTACCAGGT CGACGACAAG GACGAGGATG ACTGA
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Protein sequence | MNKPLLFLLA LLALAGCSSQ RSIPAYILTA PEDQATHSEL IPVTQVLRPQ DVLDVIFHIE MDSPNAYRIQ PGDQLEILFA TAKGLTGIKT VMPDGTVNLE YVGSLQVAGL TVDEAQALMT ERYKDTLRTP LITVSVAKAQ TRAQNLRDTL FSPNTGMSRE ITVGADGRAT FPMLGSIRLG GMNSDELEKL LNERYREEVG PIQVDVLLKS TAANEVYILG EVGQPGAYPV RRPISVLEAL TLARGYNPVT ADLESVLILH RDGERVVSRT YDMEALLDND ADSVAYLQPD DLLFVPRSSL AGAGDTMRQL ADVMLFSGFN FGFSYQVDDK DEDD
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