| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_05000 |
|---|
| Symbol | tonB |
|---|
| ID | 7759457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 473305 |
|---|
| End bp | 474177 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643803421 |
|---|
| Product | TonB protein |
|---|
| Protein accession | YP_002797729 |
|---|
| Protein GI | 226942656 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00767831 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CGATCCTCGA CGGTCCGGCG GCCGTCATCC CGGCCCGGAG CGGCGGCGAC
CGGTCGCGCC GGCTCGCCGC CGCCGGCGTG GCGCTGGCTG TGCACGCTGC CGTGCTGGCC
CTGCTGACGC TCGCCTGGCG GGACGAGCCG CCGCTGGCCC CGCAGGTGCG CACCTTGACC
ACCCGGCTGG TCGCCCTGGC GCCAGCATCC GCGCCGCTGC CGGAGCAGCC CGTCGCGGCG
CGACCGCCCG GCCCCGTGGC GGCGCCTGAG CCTCACGCGG CACGGCAGAA GCCGGAACGG
GCGGCCCTGG CGCGCAAGCG GCTGGAGATG GAAAAGCGCG AGCGGCAGCG CGTCGAGCGG
CAACGCGTGC AGGAGCGCCA CGAACAGGCG CGCCGCGAGG CCGAGGCGCT GGCGCGGCGC
GAGGCCGAAG CCGCCGAACG CGCCGCCACG GAACGCGCCC GCGTCGCGCA AGCCGCCGCC
ACAGCCGAAC GCGCCCGCGT CGCGCAAGCC GCCGCCACAG CCGAACGCGC CCGCGTCGCG
CAAGCCGCCG CCACAGCCGA ACGCGCCCGC GCCGAGGCCG CCGAAGCGGC CAGCAGCCAA
TACCTGCCGA TCGCCAAGCG GGCCCCGGAC TACCCAGAAT CCGCTCTGGA CAGGGGCATC
GAGGGCGACT GCACGGTCGG TTACCGGGTC GACGCCCAGG GCCGGGTGGA GGAGCCACGG
ATCGTCGGCG ACTGCCATCC GCTGTTCGTC CGCCCGTCGC TGGCCGCGGC CAGGACCTTC
CGCTACCGGC CACGGATCGT CGACGGCCGG GCCGTCGTCG TGCCCGACGT GAAGAACACC
TTCCACTACC GAATCCGGGA AAAGCGCCGA TGA
|
|---|
| Protein sequence | MSAAILDGPA AVIPARSGGD RSRRLAAAGV ALAVHAAVLA LLTLAWRDEP PLAPQVRTLT
TRLVALAPAS APLPEQPVAA RPPGPVAAPE PHAARQKPER AALARKRLEM EKRERQRVER
QRVQERHEQA RREAEALARR EAEAAERAAT ERARVAQAAA TAERARVAQA AATAERARVA
QAAATAERAR AEAAEAASSQ YLPIAKRAPD YPESALDRGI EGDCTVGYRV DAQGRVEEPR
IVGDCHPLFV RPSLAAARTF RYRPRIVDGR AVVVPDVKNT FHYRIREKRR
|
|---|
| |