| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_04840 |
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| Symbol | |
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| ID | 7759441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 453797 |
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| End bp | 455581 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643803405 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002797713 |
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| Protein GI | 226942640 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCA TCGCATCTCC CACCGAGGAC CGCCGGCTCG ATCCGGGCGA GCTGTTGCGC
GAGCTGGTCG CCTGCGGCCG GATCGACCGG GACAGCGCCG AGCGCTGCCT GGCGATCCAG
CGCAGCACCC CGGACAGCCG ACAGCACCCA CTCGAGTCGC TCGCCGCCCA ACGGCTCGAC
GACCGCCTCC GACCCGGCCG CAAGCTCGAC CTGGAAAGCC TCACCCAGTG GCTGGCCGAC
CATGCCGGGC AACCCTACCT GCGTATCGAC CCGCTGAAGC TCGACGTCGC CGCGATCACC
CCGCTGATGT CCCGCGCCTT CGCCCAGCGC CACGGCATCC TCGCCGTGGC GGTCGCGGCG
GACGGCGTCA CGGTCGCCAG CGCGCAACCT TTCGTCGGCG CCTGGGAGGC CGATCTGGCC
CAGGCACTCA GGCGGCCGAT CCGCCGGGTG GTGGCCAACC CCGTCGACAT CCGCCGCTTC
ACCCAGGAGT TCTACCGCCT GGCCAGGTCG GTCAGCGGCG CCTCGGCCCC GGAGCAGAAG
AGCGCCGGCA CCGGCAACTT CGAGCAGTTG TTCAGGCTCG GCGCGGCGGA CCGGGAGCCG
GACGCCAACG ACGCGCACAT CGTCACCATC GTCGACTGGC TGCTCCAGTA CGCCTTCGAG
CAGCGCGCCA GCGACATCCA CATCGAGCCG CGCCGCGAGG CCGGCAGCGT GCGCTTTCGC
ATCGACGGCG TGTTGCACAA CGTCTACCGG TTCCCGTCGC AGGTGAGCAT GGCGGTAGTC
GGCCGGCTGA AGAGTCTCGG CCGGATGAAC GTCGCCGAGA AGCGCAAGCC GCAGGACGGC
CGGGTCAAGA CCAGAAGCCC GGACGGCGGC GAGATCGAGC TGCGCCTCTC GACCCTGCCG
ACCGCCTTCG GCGAGAAGCT GGTGATGCGC ATCTTCGACC CCGAGGTATT GCTCAAGAGC
TTCGACGCCC TCGGTTTTTC CGCCGACGAC CTGCGGCGCT GGCGGAGCAT GACCGACCAA
CCCAACGGCA TCGTCCTGGT CACCGGCCCG ACCGGCTCGG GCAAGACCAC CACCCTCTAC
ACCACGCTGA AACAACTGGC GACGCCGGAA GTCAACGTCT GCACCATCGA AGACCCCATC
GAGATGATCG AACCGGCGTT CAACCAGATG CAGGTGCAGC GCAACATCGA TCTGGACTTC
GCCAGCGGCG TGCGCGCGCT GATGCGCCAG GACCCGGACA TCATCATGAT CGGCGAGATC
CGCGACCTGG AAACCGCCGA GATGGCCATC CAGGCGGCAC TCACCGGTCA CCTGGTGCTC
TCCACCCTGC ACACCAACGA CGCGCCCGGC GCCATCGCCC GCCTGCTCGA GCTGGGCGTG
CCTCATTACC TGATCAAGGC CACCCTGCTC GGAGTCATGG CCCAGCGCCT GGTACGAACC
CTGTGCCCGC ACTGCAAGGC GCCGGTCAGC CTCGATGCGG CCGACTGGCA GGCCCTCACC
CGTCCCTGGA ACGCCCCGCC GCCGAGCGCT GCGCAGCGGG CGGTGGGCTG CGCCGAATGC
CGCGACACCA GCTATCGCGG GCGCGCCGGA GTCTACGAGA TCATGCTGCT GAACGATGCC
CTCAAAGCGC TGATCAAAAC CGATACCGAC CTGCTCGCGC TGCGCCGCGC CGCCTTCAGG
GACGGCATGC GCAGCCTGCG TCTGTCCGGC GCGCTGAAGG TCGCCGCCGG CTCGACCACC
CTCGAAGAAG TCATGCGCGT CACCCCGCAG AGCGATCGGC AGTGA
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| Protein sequence | MPSIASPTED RRLDPGELLR ELVACGRIDR DSAERCLAIQ RSTPDSRQHP LESLAAQRLD
DRLRPGRKLD LESLTQWLAD HAGQPYLRID PLKLDVAAIT PLMSRAFAQR HGILAVAVAA
DGVTVASAQP FVGAWEADLA QALRRPIRRV VANPVDIRRF TQEFYRLARS VSGASAPEQK
SAGTGNFEQL FRLGAADREP DANDAHIVTI VDWLLQYAFE QRASDIHIEP RREAGSVRFR
IDGVLHNVYR FPSQVSMAVV GRLKSLGRMN VAEKRKPQDG RVKTRSPDGG EIELRLSTLP
TAFGEKLVMR IFDPEVLLKS FDALGFSADD LRRWRSMTDQ PNGIVLVTGP TGSGKTTTLY
TTLKQLATPE VNVCTIEDPI EMIEPAFNQM QVQRNIDLDF ASGVRALMRQ DPDIIMIGEI
RDLETAEMAI QAALTGHLVL STLHTNDAPG AIARLLELGV PHYLIKATLL GVMAQRLVRT
LCPHCKAPVS LDAADWQALT RPWNAPPPSA AQRAVGCAEC RDTSYRGRAG VYEIMLLNDA
LKALIKTDTD LLALRRAAFR DGMRSLRLSG ALKVAAGSTT LEEVMRVTPQ SDRQ
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