Gene Avin_03800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_03800 
SymbolfdhD 
ID7759340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp360209 
End bp361036 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID643803304 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_002797615 
Protein GI226942542 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCATC ACGCCAGTCA CCCCGCCAAG GAGCCTCCCC CGACCGTCGC GGGAACTTAT 
CGCTATGCCG ATCTGGACCA GCCTGCGCGG GTTTGCGAGA CGCAGTTGGC CACCGAGTGC
GCGCTGGCGA TCAGCTACAA CGGCCTCGGC CATGCGGTGA TGATGGTCAC CCCGGAGGCG
CTGGAGGACT TCGTCCAGGG TTTCACTCTG ACCGCCGGCA TCATCGATAG TGCCGATGAA
ATCTACGATA TGCGGCTCGT CGAGGACGCC GAAGCCTGGC GGGCCGAGGT GCGGATTTCC
AGCCGTGCCT TCTGGCGGCT CAAGCAGCAG CGCCGCCGGC TGGCCGGCAG CAGCGGCTGC
GGCATCTGCG GGGTGGAGGC GCTGGAGCAG GCGCTGCCGC GACTCACGGC GCTCGATCCG
GCGCCGCTGC CGCCGGCCGG ACAGCTCGCG AACCTGCGCG AGCGCATCGC CGCCGAGCAG
CGCCTGGCCC GCCGCAGCGG CGCCCTGCAT GCCGCGCTGT TCGTCGACGG AGACGGCGAG
ATCCGCCTGT GCCGCGAGGA CATCGGCCGG CACAACGCCC TCGACAAGCT GATCGGCGCC
CTCGTGCGCG AACGACTGGG GGCCGGCCGC GGCTTCGCCG TGGTCACCAG CCGCTGCGGC
GTCGAACTGT TGCACAAGGC GGTGCGCGCC GGCATCGGCA CCCTGGTCGG GCTGTCGGCG
CCCACCGCGC TGACCGTGGA CTGGGCGCGC CGCCACCATC TCAACCTGAT CCACCTGCCG
CACCACAGCG CGGCGCGGGT CTACAGCCCG GTACCCCGCG CTCCGTAA
 
Protein sequence
MPHHASHPAK EPPPTVAGTY RYADLDQPAR VCETQLATEC ALAISYNGLG HAVMMVTPEA 
LEDFVQGFTL TAGIIDSADE IYDMRLVEDA EAWRAEVRIS SRAFWRLKQQ RRRLAGSSGC
GICGVEALEQ ALPRLTALDP APLPPAGQLA NLRERIAAEQ RLARRSGALH AALFVDGDGE
IRLCREDIGR HNALDKLIGA LVRERLGAGR GFAVVTSRCG VELLHKAVRA GIGTLVGLSA
PTALTVDWAR RHHLNLIHLP HHSAARVYSP VPRAP